miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00766;mir-335;AAGW01323748.1/3556-3648 9986:Oryctolagus
cuniculus (rabbit)
Length = 93
Score = 145 bits (73), Expect = 1e-34
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 3 ttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 62
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ttttgggcgggagtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 62
Query: 63 tgctcctgacctcctctcatt 83
|||||||||||||||||||||
Sbjct: 63 tgctcctgacctcctctcatt 83
>RF00766;mir-335;ABRQ01225307.1/3130-3038 9813:Procavia capensis
(cape rock hyrax)
Length = 93
Score = 75.8 bits (38), Expect = 9e-14
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 11 gggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgctcctg 70
|||||||||||||||||||| |||| ||| || | |||| ||||||||||| ||||||||
Sbjct: 11 gggggtcaagagcaataacggaaaacgttggttagaaactgtttttcattactgctcctg 70
Query: 71 acctcc 76
||||||
Sbjct: 71 acctcc 76
