miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30973_ppy-mir-370:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 agacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtg 60
Query: 61 gaacctggtctgtct 75
|||||||||||||||
Sbjct: 61 gaacctggtctgtct 75
>30346_ptr-mir-370:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 2 gacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtgg 60
Query: 62 aacctggtctgtct 75
||||||||||||||
Sbjct: 61 aacctggtctgtct 74
>27869_mml-mir-370:mirbase
Length = 75
Score = 141 bits (71), Expect = 8e-35
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 1 agacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 agacagagaagccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtctgtct 75
|||||||||||||||
Sbjct: 61 gaacctggtctgtct 75
>33344_bta-mir-370:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 cagagaagccaggtcacgtctctgcagttacaccgctcacgagtgcctgctggggtggaa 63
Query: 64 cctggtctgtct 75
||||||||||||
Sbjct: 64 cctggtctgtct 75
>26818_cfa-mir-370:mirbase
Length = 79
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 agacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtg 60
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 agacagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtctgtct 75
|||||||||||||||
Sbjct: 61 gaacctggtctgtct 75
>27151_eca-mir-370:mirbase
Length = 75
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 agacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtg 60
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 agacagagaggccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtctgtct 75
|||||||||||||||
Sbjct: 61 gaacctggtctgtct 75
>33815_oar-mir-370:mirbase
Length = 107
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
Query: 64 cctggtctgtct 75
|||||| |||||
Sbjct: 77 cctggtatgtct 88
>33816_oar-mir-370:mirbase
Length = 107
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 4 cagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaa 63
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 17 cagagaagccaggtcacgtctctgcagttacaccgctctcgagtgcctgctggggtggaa 76
Query: 64 cctggtctgtct 75
|||||| |||||
Sbjct: 77 cctggtatgtct 88
>32886_rno-mir-370:mirbase
Length = 79
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 1 agacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtg 60
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 agacagagagaccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtg 60
Query: 61 gaacctggtctgtct 75
||||||||| |||||
Sbjct: 61 gaacctggtttgtct 75
>32041_mmu-mir-370:mirbase
Length = 79
Score = 111 bits (56), Expect = 7e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 12 ccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtggaacctggtct 71
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 12 ccaggtcacgtctctgcagttacacagctcatgagtgcctgctggggtggaacctggttt 71
Query: 72 gtct 75
||||
Sbjct: 72 gtct 75
