miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00665;mir-290;AANU01181644.1/2797-2879 9544:Macaca mulatta
          (rhesus monkey)
          Length = 83

 Score = 97.6 bits (49), Expect = 2e-20
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggatactcaaaatgggggcgctttcctttttgtctgtactgggaagtgcttcgattttg 60
          ||||||| ||||||||| || |||||| |||||||||| |||||||||||||||||||||
Sbjct: 8  gggatacccaaaatgggagcactttcccttttgtctgtgctgggaagtgcttcgattttg 67

                   
Query: 61 gggtgtccc 69
          |||||||||
Sbjct: 68 gggtgtccc 76




>RF00665;mir-290;EU086472.1/196476-196558 9509:Ateles geoffroyi
          (black-handed spider monkey)
          Length = 83

 Score = 69.9 bits (35), Expect = 4e-12
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                 
Query: 9  caaaatgggggcgctttcctttttgtctgtactgggaagtgcttcgattttgggg 63
          |||||| | |||||||| ||||||||||||||||| ||||||||| |||||||||
Sbjct: 16 caaaatagaggcgcttttctttttgtctgtactggaaagtgcttccattttgggg 70