miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00839;mir-452;AAGU02398934.1/1672-1588 9785:Loxodonta africana
(African savanna elephant)
Length = 85
Score = 161 bits (81), Expect = 2e-39
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 gctaagcacttacaactgtttgcagaggaaactgagactttgtaactatgtctcagtctc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gctaagcacttacaactgtttgcagaggaaactgagactttgtagctatgtctcagtctc 60
Query: 61 atctgcaaagaagtaagtgctttgc 85
|||||||||||||||||||||||||
Sbjct: 61 atctgcaaagaagtaagtgctttgc 85
>RF00839;mir-452;AAWR02040592.1/88041-87978 9796:Equus caballus
(horse)
Length = 64
Score = 81.8 bits (41), Expect = 1e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 gctaagcacttacaactgtttgcagaggaaactgagacttt 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctaagcacttacaactgtttgcagaggaaactgagacttt 41
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tctgcaaagaagtaagtgctttgc 85
||||||||||||||||||||||||
Sbjct: 41 tctgcaaagaagtaagtgctttgc 64
>RF00839;mir-452;AANN01683404.1/5649-5565 9365:Erinaceus europaeus
(western European hedgehog)
Length = 85
Score = 81.8 bits (41), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1 gctaagcacttacaactgtttgcagaggaaactgagactttgtaactatgtctcagtctc 60
|||| |||||||||||||||||||||||||||||||||| |||| | || |||||| |
Sbjct: 1 gctaggcacttacaactgtttgcagaggaaactgagactctgtacccgtggctcagtttt 60
Query: 61 atctgcaaagaagtaagtgctttgc 85
| ||||||| ||||||||||||||
Sbjct: 61 ctttgcaaaggagtaagtgctttgc 85
