miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41690_vvi-MIR535c:mirbase
          Length = 101

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                      
Query: 12 tgacaacgagagagagcacgcttgttatcactcatccgaggtatatgattgtgtacgggc 71
          |||||||||||||||||||||| ||   || |||| ||||| | |||| ||||||| |||
Sbjct: 11 tgacaacgagagagagcacgctagtctgcattcatgcgaggaacatgactgtgtacaggc 70

                                     
Query: 72 gtgctctatgtcgttgtcatacaatct 98
          ||||||| ||||| |||||||||||||
Sbjct: 71 gtgctctctgtcgctgtcatacaatct 97




>41689_vvi-MIR535b:mirbase
          Length = 101

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                      
Query: 12 tgacaacgagagagagcacgcttgttatcactcatccgaggtatatgattgtgtacgggc 71
          |||||||||||||||||||||| || | || |||| ||||| | |||| ||||||| |||
Sbjct: 11 tgacaacgagagagagcacgctagtcagcattcatgcgaggaacatgactgtgtacaggc 70

                                     
Query: 72 gtgctctatgtcgttgtcatacaatct 98
          ||||||| | ||| |||||||||||||
Sbjct: 71 gtgctctctctcgctgtcatacaatct 97




>41688_vvi-MIR535a:mirbase
          Length = 101

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                      
Query: 12 tgacaacgagagagagcacgcttgttatcactcatccgaggtatatgattgtgtacgggc 71
          |||||||||||||||||||||| || | || |||| ||||| | |||| ||||||| |||
Sbjct: 11 tgacaacgagagagagcacgctagtcagcattcatgcgaggaacatgactgtgtacaggc 70

                                     
Query: 72 gtgctctatgtcgttgtcatacaatct 98
          ||||||| | ||| |||||||||||||
Sbjct: 71 gtgctctctctcgctgtcatacaatct 97




>40392_rco-MIR535:mirbase
          Length = 91

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacaacgagagagagcacgcttgtta 38
          |||||||||||||||||||||||||||
Sbjct: 6  tgacaacgagagagagcacgcttgtta 32




>39518_ppt-MIR535a:mirbase
          Length = 135

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 ggtgacaacgagagagagcacgct 33
          ||||||||||||||||||||||||
Sbjct: 25 ggtgacaacgagagagagcacgct 48




>42109_osa-MIR535:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 ggtgacaacgagagagagcacgc 32
          |||||||||||||||||||||||
Sbjct: 4  ggtgacaacgagagagagcacgc 26




>39521_ppt-MIR535d:mirbase
          Length = 85

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 ggtgacaacgagagagagcacgc 32
          |||||||||||||||||||||||
Sbjct: 1  ggtgacaacgagagagagcacgc 23




>39520_ppt-MIR535c:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gtgacaacgagagagagcacgct 33
          |||||||||||||||||||||||
Sbjct: 1  gtgacaacgagagagagcacgct 23




>39519_ppt-MIR535b:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gtgacaacgagagagagcacgct 33
          |||||||||||||||||||||||
Sbjct: 1  gtgacaacgagagagagcacgct 23




>41159_tcc-MIR535:mirbase
          Length = 120

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 12 tgacaacgagagagagcacgct 33
          ||||||||||||||||||||||
Sbjct: 98 tgacaacgagagagagcacgct 77



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tgacaacgagagagagcacgcttgt 36
          ||||||||| |||||||||||||||
Sbjct: 21 tgacaacgatagagagcacgcttgt 45




>41206_aqc-MIR535:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacaacgagagagagcacgc 32
          |||||||||||||||||||||
Sbjct: 1  tgacaacgagagagagcacgc 21




>39387_pab-MIR535:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacaacgagagagagcacgc 32
          |||||||||||||||||||||
Sbjct: 24 tgacaacgagagagagcacgc 44