miRNEST 2.0, an integrative microRNA resource :: BLAST
>40473_gma-MIR396a:mirbase
Length = 140
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 112 ttttggggttcaataaagctgtgggaagatacatatagagtcaac 156
||||| ||||||||||||||||||||||||||| |||| ||||||
Sbjct: 96 ttttgcggttcaataaagctgtgggaagatacagatagggtcaac 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 16 ctctttttgtacttttccacagctttcttgaactgcat 53
|||| |||||| | ||||||||||||||||||||||||
Sbjct: 7 ctctctttgtattcttccacagctttcttgaactgcat 44
>41242_csi-MIR396b:mirbase
Length = 134
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 21 tttgtacttttccacagctttcttgaactgcat 53
|||||| ||||||||||||||||||||||||||
Sbjct: 11 tttgtatttttccacagctttcttgaactgcat 43
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 ggttcaataaagctgtgggaagataca 144
|||||||||||||||||||||||||||
Sbjct: 86 ggttcaataaagctgtgggaagataca 112
>40085_ath-MIR396a:mirbase
Length = 151
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 113 tttggggttcaataaagctgtgggaagataca 144
|||| |||||||||||||||||||||||||||
Sbjct: 117 tttgcggttcaataaagctgtgggaagataca 148
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgca 52
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 ggttcaataaagctgtgggaagataca 144
|||||||||||||||||||||||||||
Sbjct: 105 ggttcaataaagctgtgggaagataca 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 21 tttgtacttttccacagctttcttgaactgca 52
|||||| | |||||||||||||||||||||||
Sbjct: 2 tttgtattcttccacagctttcttgaactgca 33
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 ggttcaataaagctgtgggaagataca 144
|||||||||||||||||||||||||||
Sbjct: 96 ggttcaataaagctgtgggaagataca 122
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgca 52
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 ggttcaataaagctgtgggaagataca 144
|||||||||||||||||||||||||||
Sbjct: 106 ggttcaataaagctgtgggaagataca 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgca 52
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 ggttcaataaagctgtgggaagataca 144
|||||||||||||||||||||||||||
Sbjct: 106 ggttcaataaagctgtgggaagataca 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgca 52
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 ttttggggttcaataaagctgtgggaagata 142
||||| |||||||||||||||||||||||||
Sbjct: 65 ttttgcggttcaataaagctgtgggaagata 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaactgcat 29
>40646_lja-MIR396:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 112 ttttggggttcaataaagctgtgggaagata 142
||||| |||||||||||||||||||||||||
Sbjct: 69 ttttgcggttcaataaagctgtgggaagata 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 21 tttgtacttttccacagctttcttgaactgcat 53
|||||| | ||||||||||||||||||||||||
Sbjct: 7 tttgtattcttccacagctttcttgaactgcat 39
>39877_aly-MIR396a:mirbase
Length = 172
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 113 tttggggttcaataaagctgtgggaagatac 143
|||| ||||||||||||||||||||||||||
Sbjct: 127 tttgcggttcaataaagctgtgggaagatac 157
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgca 52
|||||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaactgca 46
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 118 ggttcaataaagctgtgggaagatac 143
||||||||||||||||||||||||||
Sbjct: 89 ggttcaataaagctgtgggaagatac 114
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 21 tttgtacttttccacagctttcttgaactgcat 53
|||||| | ||||||||||||||||||||||||
Sbjct: 2 tttgtattcttccacagctttcttgaactgcat 34
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaagatac 143
|||||||||||||||||||||||||
Sbjct: 113 gttcaataaagctgtgggaagatac 137
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 tttgtacttttccacagctttcttgaactgc 51
|||||| | ||||||||||||||||||||||
Sbjct: 12 tttgtattcttccacagctttcttgaactgc 42
>40086_ath-MIR396b:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tacttttccacagctttcttgaact 49
|||||||||||||||||||||||||
Sbjct: 6 tacttttccacagctttcttgaact 30
>39426_pta-MIR396:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tacttttccacagctttcttgaact 49
|||||||||||||||||||||||||
Sbjct: 12 tacttttccacagctttcttgaact 36
>42814_zma-MIR396h:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgcat 75
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 20 gttcaataaagctgtgggaa 1
>42813_zma-MIR396g:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgcat 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 20 gttcaataaagctgtgggaa 1
>42808_zma-MIR396b:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 99 gttcaataaagctgtgggaa 118
>42807_zma-MIR396a:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 100 gttcaataaagctgtgggaa 119
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 91 gttcaataaagctgtgggaa 110
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 88 gttcaataaagctgtgggaa 107
>42472_ssp-MIR396:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>42461_sof-MIR396:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 97 gttcaataaagctgtgggaa 116
>42027_osa-MIR396b:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcat 34
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 88 gttcaataaagctgtgggaa 107
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgcat 56
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 101 gttcaataaagctgtgggaa 120
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgcat 53
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 113 tttggggttcaataaagctgtgggaa 138
|||| |||||||||||||||||||||
Sbjct: 96 tttgcggttcaataaagctgtgggaa 121
>42026_osa-MIR396a:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgca 52
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 126 gttcaataaagctgtgggaa 145
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 11 cttttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 11 cttttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 8 cttttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 8 cttttccacagctttcttgaact 30
>41212_ccl-MIR396:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 140 cttttccacagctttcttgaact 162
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 18 cttttccacagctttcttgaact 40
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 ttttccacagctttcttgaactg 50
|||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaactg 41
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 3 cttttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 8 cttttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 18 cttttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 18 cttttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttttccacagctttcttgaact 49
|||||||||||||||||||||||
Sbjct: 3 cttttccacagctttcttgaact 25
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactgc 51
||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgc 54
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gttcaataaagctgtgggaa 138
||||||||||||||||||||
Sbjct: 102 gttcaataaagctgtgggaa 121
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 ttttccacagctttcttgaact 49
||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 ttttccacagctttcttgaact 49
||||||||||||||||||||||
Sbjct: 11 ttttccacagctttcttgaact 32
>39878_aly-MIR396b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 ttttccacagctttcttgaact 49
||||||||||||||||||||||
Sbjct: 30 ttttccacagctttcttgaact 51
>42812_zma-MIR396f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tttccacagctttcttgaact 49
|||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tttccacagctttcttgaact 49
|||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tttccacagctttcttgaact 49
|||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tttccacagctttcttgaact 49
|||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tttccacagctttcttgaact 49
|||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaact 51
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactg 50
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>41241_csi-MIR396a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactg 50
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactg 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 28 ttttccacagctttcttgaa 47
||||||||||||||||||||
Sbjct: 109 ttttccacagctttcttgaa 90
>40477_gma-MIR396e:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 ttccacagctttcttgaactg 50
|||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaactg 27
