miRNEST 2.0, an integrative microRNA resource :: BLAST
>40473_gma-MIR396a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 9 tctctttctgttcttccacagctttcttgaactgcat 45
||||||| | |||||||||||||||||||||||||||
Sbjct: 8 tctctttgtattcttccacagctttcttgaactgcat 44
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 tttgcagttcaacaaagctgtgggaagata 123
||||| |||||| |||||||||||||||||
Sbjct: 97 tttgcggttcaataaagctgtgggaagata 126
>40646_lja-MIR396:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 ctctttctgttcttccacagctttcttgaactgcat 45
|||||| | |||||||||||||||||||||||||||
Sbjct: 4 ctctttgtattcttccacagctttcttgaactgcat 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 tttgcagttcaacaaagctgtgggaagata 123
||||| |||||| |||||||||||||||||
Sbjct: 70 tttgcggttcaataaagctgtgggaagata 99
>42814_zma-MIR396h:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 11 tctttctgttcttccacagctttcttgaactgcat 45
||||| || ||||||||||||||||||||||||||
Sbjct: 109 tctttgtgatcttccacagctttcttgaactgcat 75
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 96 tgcagttcaacaaagctgtgggaa 119
|||||||||| |||||||||||||
Sbjct: 24 tgcagttcaataaagctgtgggaa 1
>42808_zma-MIR396b:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 11 tctttctgttcttccacagctttcttgaactgcat 45
||||| || ||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 tgcagttcaacaaagctgtgggaa 119
|||||||||| |||||||||||||
Sbjct: 95 tgcagttcaataaagctgtgggaa 118
>42807_zma-MIR396a:mirbase
Length = 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactgcatg 46
|||||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgcatg 45
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 11 tctttctgttcttccacagctttcttgaactgcat 45
||||| || ||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 tgcagttcaacaaagctgtgggaa 119
|||||||||| |||||||||||||
Sbjct: 87 tgcagttcaataaagctgtgggaa 110
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactgcatg 46
|||||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgcatg 45
>42461_sof-MIR396:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 11 tctttctgttcttccacagctttcttgaactgcat 45
||||| || ||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 tgcagttcaacaaagctgtgggaa 119
|||||||||| |||||||||||||
Sbjct: 93 tgcagttcaataaagctgtgggaa 116
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgcat 45
|||||||||||||||||||||||||||
Sbjct: 8 ttcttccacagctttcttgaactgcat 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 ttgcagttcaacaaagctgtgggaagata 123
|||| |||||| |||||||||||||||||
Sbjct: 85 ttgcggttcaataaagctgtgggaagata 113
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcatggt 48
|||||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatggt 27
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgcat 45
|||||||||||||||||||||||||||
Sbjct: 3 ttcttccacagctttcttgaactgcat 29
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 tttgcagttcaacaaagctgtgggaagata 123
||||| |||||| |||||||||||||||||
Sbjct: 66 tttgcggttcaataaagctgtgggaagata 95
>42813_zma-MIR396g:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 20 tcttccacagctttcttgaactgcat 45
||||||||||||||||||||||||||
Sbjct: 113 tcttccacagctttcttgaactgcat 88
>42027_osa-MIR396b:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactgcat 45
||||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgcat 34
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 tgcagttcaacaaagctgtgggaa 119
|||||||||| |||||||||||||
Sbjct: 84 tgcagttcaataaagctgtgggaa 107
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactgcat 45
||||||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgcat 56
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgca 44
||||||||||||||||||||||||||
Sbjct: 8 ttcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 100 gttcaacaaagctgtgggaagata 123
|||||| |||||||||||||||||
Sbjct: 106 gttcaataaagctgtgggaagata 129
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgca 44
||||||||||||||||||||||||||
Sbjct: 8 ttcttccacagctttcttgaactgca 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 ttgcagttcaacaaagctgtgggaagata 123
|||| |||||| |||||||||||||||||
Sbjct: 92 ttgcggttcaataaagctgtgggaagata 120
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 ctctttctgttcttccacagctttcttgaactgc 43
|||||| | |||||||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaactgc 42
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 95 ttgcagttcaacaaagctgtgggaagata 123
||||||||||| |||||||||||||||||
Sbjct: 108 ttgcagttcaataaagctgtgggaagata 136
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgca 44
||||||||||||||||||||||||||
Sbjct: 8 ttcttccacagctttcttgaactgca 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 ttgcagttcaacaaagctgtgggaagata 123
|||| |||||| |||||||||||||||||
Sbjct: 102 ttgcggttcaataaagctgtgggaagata 130
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgca 44
||||||||||||||||||||||||||
Sbjct: 8 ttcttccacagctttcttgaactgca 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 ttgcagttcaacaaagctgtgggaagata 123
|||| |||||| |||||||||||||||||
Sbjct: 102 ttgcggttcaataaagctgtgggaagata 130
>40085_ath-MIR396a:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgca 44
||||||||||||||||||||||||||
Sbjct: 8 ttcttccacagctttcttgaactgca 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 tttgcagttcaacaaagctgtgggaagata 123
||||| |||||| |||||||||||||||||
Sbjct: 117 tttgcggttcaataaagctgtgggaagata 146
>39877_aly-MIR396a:mirbase
Length = 172
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 ttcttccacagctttcttgaactgca 44
||||||||||||||||||||||||||
Sbjct: 21 ttcttccacagctttcttgaactgca 46
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 tttgcagttcaacaaagctgtgggaagata 123
||||| |||||| |||||||||||||||||
Sbjct: 127 tttgcggttcaataaagctgtgggaagata 156
>42026_osa-MIR396a:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactgca 44
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
>41241_csi-MIR396a:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 10 ctctttctgttcttccacagctttcttgaactg 42
|||||| || |||||||||||||||||||||||
Sbjct: 9 ctctttgtgatcttccacagctttcttgaactg 41
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 6 ggttctctttctgttcttccacagctttcttgaactg 42
|||||||||| || | |||||||||||||||||||||
Sbjct: 5 ggttctctttgtgattttccacagctttcttgaactg 41
>42472_ssp-MIR396:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcat 45
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactgc 43
||||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgc 54
>41242_csi-MIR396b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaactgcat 45
||||||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaactgcat 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 ttgcagttcaacaaagctgtgggaagata 123
|||| |||||| |||||||||||||||||
Sbjct: 82 ttgcggttcaataaagctgtgggaagata 110
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactg 42
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>40477_gma-MIR396e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaactg 42
|||||||||||||||||||||||
Sbjct: 5 tcttccacagctttcttgaactg 27
>39379_pab-MIR396a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tcttccacagctttcttgaact 41
||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaact 35
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttcttccacagctttcttgaact 41
|||| ||||||||||||||||||||
Sbjct: 6 tgtttttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttcttccacagctttcttgaact 41
|||| ||||||||||||||||||||
Sbjct: 8 tgtttttccacagctttcttgaact 32
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttcttccacagctttcttgaact 41
|||| ||||||||||||||||||||
Sbjct: 16 tgttattccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 17 tgttcttccacagctttcttgaact 41
|||||| ||||||||||||||||||
Sbjct: 122 tgttctcccacagctttcttgaact 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40086_ath-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39878_aly-MIR396b:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 ttccacagctttcttgaact 41
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
