miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01920;mir-764;AANU01095684.1/3694-3803 9544:Macaca mulatta
(rhesus monkey)
Length = 110
Score = 137 bits (69), Expect = 3e-32
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 15 aatctaggaggcaggtgctcacttgtcctcctccatggttggaaaatacaggggggaggc 74
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 75 catagtggcaactgtcaccatgatt 99
>RF01920;mir-764;ABRQ01091273.1/776-885 9813:Procavia capensis
(cape rock hyrax)
Length = 110
Score = 129 bits (65), Expect = 6e-30
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
|||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 15 aatctaggagacaggtgctcacttgtcctcctccatgattggaaaatacagggaggaggc 74
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| ||| |||||
Sbjct: 75 catagtggcaactgtcaccgtgatt 99
>RF01920;mir-764;ABRR01198668.1/21902-22011 30538:Lama pacos
(alpaca)
Length = 110
Score = 121 bits (61), Expect = 1e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
|||||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||
Sbjct: 15 aatctaggaggcaggtgctcacttgtcctcttccatgcttagaagatatagggaggaggc 74
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 75 catagtggcaactgtcaccatgatt 99
>RF01920;mir-764;AAIY01059417.1/2952-2845 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 108
Score = 107 bits (54), Expect = 2e-23
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 14 aatctaggaggcaggtgctcacttgtcctcctccatgcttgg-aaatagagggaggaggt 72
Query: 61 catagtggcaactg 74
||||||||||||||
Sbjct: 73 catagtggcaactg 86
>RF01920;mir-764;AAKN02039766.1/25930-25821 10141:Cavia porcellus
(domestic guinea pig)
Length = 110
Score = 101 bits (51), Expect = 1e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 15 gtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggccatagtggcaactg 74
||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||
Sbjct: 29 gtgctcacttgtcctcctccatgtttgaaagatacagggaggaggccatagtggcaactg 88
Query: 75 ttaccatgatt 85
| |||||||||
Sbjct: 89 tcaccatgatt 99
>RF01920;mir-764;AAHY01204437.1/3239-3132 10090:Mus musculus
(house mouse)
Length = 108
Score = 97.6 bits (49), Expect = 2e-20
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||| |||||||||||||||| ||||||||||||||||| |||| || |||||||||
Sbjct: 14 aatcttggaggcaggtgctcacatgtcctcctccatgctt-ataaatacatggaggaggc 72
Query: 61 catagtggcaactgttaccatgatt 85
||||||||||||||| |||||||||
Sbjct: 73 catagtggcaactgtcaccatgatt 97
>RF01920;mir-764;AAFC03083039.1/34010-33902 9913:Bos taurus
(cattle)
Length = 109
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 aatctaggaggcaggtgctcacttgtcctcctccatgcttggaaaatgcagggaggaggc 60
||||||| ||||||||||||||| ||||| ||||| | || ||||| ||||||||||||
Sbjct: 15 aatctagtaggcaggtgctcactcgtccttctccacggtt-aaaaatacagggaggaggc 73
Query: 61 catagtggcaact 73
|| | ||||||||
Sbjct: 74 cagaatggcaact 86
