miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01042;mir-891;AANU01202537.1/38748-38670 9544:Macaca mulatta
(rhesus monkey)
Length = 79
Score = 157 bits (79), Expect = 2e-38
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
Query: 61 tgttgttagggtcaaaaga 79
|||||||||||||||||||
Sbjct: 61 tgttgttagggtcaaaaga 79
>RF01042;mir-891;ABSL01111450.1/3190-3112 9606:Homo sapiens
(human)
Length = 79
Score = 93.7 bits (47), Expect = 3e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 ccttaatccttgcaacttacctgagtcattgattcagtaaaacattcaatggcacatgtt 60
|||||||||||||||| ||||||| || ||||||||||||| | ||| |||||||||||
Sbjct: 1 ccttaatccttgcaacgaacctgagccactgattcagtaaaatactcagtggcacatgtt 60
Query: 61 tgttgttagggtcaaaaga 79
|||||| ||||||||||||
Sbjct: 61 tgttgtgagggtcaaaaga 79
>RF01042;mir-891;ABRT010347702.1/1469-1391 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 56.0 bits (28), Expect = 7e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 34 tcagtaaaacattcaatggcacatgtttgttgttagggtc 73
||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 34 tcagtaaaacattcattggcacgtgtttgttgtgagggtc 73
>RF01042;mir-891;ABRT010299639.1/4382-4460 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 37 gtaaaacattcaatggcacatgtttgttgttagggtcaa 75
|||||||||||| ||||||| ||||||||| ||||||||
Sbjct: 37 gtaaaacattcactggcacacgtttgttgtgagggtcaa 75
>RF01042;mir-891;ABRT010099436.1/6142-6064 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 34 tcagtaaaacattcaatggcacatgtttgttgttaggg 71
||||||||||||||| |||||||||||||||| ||||
Sbjct: 34 tcagtaaaacattcacaggcacatgtttgttgtgaggg 71
>RF01042;mir-891;ABRT010099431.1/4448-4370 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 34 tcagtaaaacattcaatggcacatgtttgttgttagggtcaa 75
||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 34 tcagtaaaacattcatgagcacatgtttgttgtgagggtcaa 75
>RF01042;mir-891;ABRT010607772.1/171-249 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 38 taaaacattcaatggcacatgtttgttgttagggtcaa 75
||||||||||| |||||| ||||||||| ||||||||
Sbjct: 38 taaaacattcacaggcacaggtttgttgtgagggtcaa 75
>RF01042;mir-891;ABRT010870146.1/566-488 9478:Tarsius syrichta
(Philippine tarsier)
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 38 taaaacattcaatggcacatgtttgttgttagggtcaa 75
||||||||||| |||||||||||||||| || |||||
Sbjct: 38 taaaacattcatgggcacatgtttgttgtgagagtcaa 75
