miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00907;mir-941;AADC01141844.1/28917-28829 9606:Homo sapiens
(human)
Length = 89
Score = 161 bits (81), Expect = 2e-39
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 17 cccggctgtgtgcacatgtgcccagggcccgggacagcgccacggaagaggacgcacccg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccggctgtgtgcacatgtgcccagggcccgggacagcgccacggaagaggacgcacccg 60
Query: 77 gctgtgtgcacatgtgcccagggcccggg 105
||||| || ||||||||||||||||||||
Sbjct: 61 gctgtatggacatgtgcccagggcccggg 89
Score = 89.7 bits (45), Expect = 8e-18
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 73 cccggctgtgtgcacatgtgcccagggcccgggacagcgccacgg 117
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccggctgtgtgcacatgtgcccagggcccgggacagcgccacgg 45
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 4 ggaagaggacgcacccggctgtgtgcacatgtgcccagggcccggg 49
|||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 44 ggaagaggacgcacccggctgtatggacatgtgcccagggcccggg 89
>RF00907;mir-941;CABD01769959.2/312-221 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 92
Score = 103 bits (52), Expect = 5e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 17 cccggctgtgtgcacatgtgcccagggcccgggacagcgccacggaagaggacgcacccg 76
|||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 1 cccggctgtgtggacatgtgcccagggcccaggacagcgccacggaagaggacacaccct 60
Query: 77 gctgtgtg 84
||||||||
Sbjct: 61 gctgtgtg 68
Score = 73.8 bits (37), Expect = 4e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 73 cccggctgtgtgcacatgtgcccagggcccgggacagcgccacgg 117
|||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 1 cccggctgtgtggacatgtgcccagggcccaggacagcgccacgg 45
