miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30714_ptr-mir-1302-1:mirbase
Length = 142
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 cagaaagcccagttaaatttgaatttcaagtaaacaatgaataattgtgtatgtaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaaagcccagttaaatttgaatttcaagtaaacaatgaataattgtgtatgtaagaat 60
Query: 61 atcccatacaatatttgggacatacttatgctaaaaattattccttgcttatctgaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcccatacaatatttgggacatacttatgctaaaaattattccttgcttatctgaaatt 120
Query: 121 caaatgtaactaggattcctgt 142
||||||||||||||||||||||
Sbjct: 121 caaatgtaactaggattcctgt 142
>27302_eca-mir-1302c-5:mirbase
Length = 122
Score = 93.7 bits (47), Expect = 3e-20
Identities = 106/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 10 cagttaaatttgaatttcaagtaaacaatgaataattgtgta-tgtaagaatatcccata 68
|||||||||||||||||| | ||||||||||||||| | || |||||| |||||||||
Sbjct: 1 cagttaaatttgaatttctgggaaacaatgaataattttttagtgtaagtatatcccatg 60
Query: 69 caatatttgggacatacttatgctaaaaattattccttgcttatctgaaattcaaatgta 128
||||||||| ||||||||||| ||||||| || | |||| || | ||||||||| |||||
Sbjct: 61 caatatttgcgacatacttatactaaaaa-taatgcttgtttgtttgaaattcagatgta 119
Query: 129 act 131
|||
Sbjct: 120 act 122
>27301_eca-mir-1302b-2:mirbase
Length = 134
Score = 71.9 bits (36), Expect = 1e-13
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 7 gcccagttaaatttgaatttcaagtaaacaatgaataattgtgt-atgtaagaatatccc 65
|||| ||||||||| |||||||| | |||||||||||||| | | || |||| || ||||
Sbjct: 5 gcccggttaaatttcaatttcaaatcaacaatgaataattttttaatctaagtatgtccc 64
Query: 66 atacaatatttgggacatacttat 89
|| |||||||||||||||||||||
Sbjct: 65 atgcaatatttgggacatacttat 88
>29166_hsa-mir-1302-6:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 68 acaatatttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||||||||
Sbjct: 49 acaatatttgggacatacttatgctaaaaa 78
>30719_ptr-mir-1302-6:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 68 acaatatttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||||||||
Sbjct: 49 acaatatttgggacatacttatgctaaaaa 78
>31358_ppy-mir-1302-3:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 68 acaatatttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||||||||
Sbjct: 49 acaatatttgggacatacttatgctaaaaa 78
>27303_eca-mir-1302d-4:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 69 caatatttgggacatacttatgctaaaaa 97
|||||||||||||||||||||||||||||
Sbjct: 52 caatatttgggacatacttatgctaaaaa 80
>29165_hsa-mir-1302-5:mirbase
Length = 150
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 54 taagaatatcccatacaatatttgggacatacttatgctaaaa 96
|||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 56 taagtatatcccatgtaatctttgggacatacttatgctaaaa 98
>29168_hsa-mir-1302-8:mirbase
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 tatttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||||
Sbjct: 63 tatttgggacatacttatgctaaaaa 88
>30721_ptr-mir-1302-8:mirbase
Length = 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 tatttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||||
Sbjct: 63 tatttgggacatacttatgctaaaaa 88
>31360_ppy-mir-1302-5:mirbase
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 tatttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||||
Sbjct: 63 tatttgggacatacttatgctaaaaa 88
>29164_hsa-mir-1302-4:mirbase
Length = 150
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 64 ccatacaatatttgggacatacttatgctaaaa 96
|||| ||| ||||||||||||||||||||||||
Sbjct: 66 ccatgcaacatttgggacatacttatgctaaaa 98
>29167_hsa-mir-1302-7:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 69 caatatttgggacatacttatgctaaaaa 97
||||| |||||||||||||||||||||||
Sbjct: 33 caataattgggacatacttatgctaaaaa 61
>30720_ptr-mir-1302-7:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 69 caatatttgggacatacttatgctaaaaa 97
||||| |||||||||||||||||||||||
Sbjct: 33 caataattgggacatacttatgctaaaaa 61
>29160_hsa-mir-1302-10:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>29161_hsa-mir-1302-11:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>29162_hsa-mir-1302-2:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>29163_hsa-mir-1302-3:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>29169_hsa-mir-1302-9:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>30715_ptr-mir-1302-2:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>30716_ptr-mir-1302-3:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 71 tttgggacatacttatgctaaaaa 94
>30717_ptr-mir-1302-4:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>30718_ptr-mir-1302-5:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>31356_ppy-mir-1302-1:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>31357_ppy-mir-1302-2:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tttgggacatacttatgctaaaaa 97
||||||||||||||||||||||||
Sbjct: 72 tttgggacatacttatgctaaaaa 95
>31359_ppy-mir-1302-4:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 ttgggacatacttatgctaaaaa 97
|||||||||||||||||||||||
Sbjct: 40 ttgggacatacttatgctaaaaa 62
>27300_eca-mir-1302-1:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 73 atttgggacatacttatgctaaaa 96
||||||||||||||||| ||||||
Sbjct: 31 atttgggacatacttatactaaaa 54
