miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30720_ptr-mir-1302-7:mirbase
Length = 71
Score = 103 bits (52), Expect = 2e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 1 acaacatgtttttaggacatgtatgtctggtgcaataattgggacatacttatgct 56
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaacatgtttttagtacatgtatgtctggtgcaataattgggacatacttatgct 56
>31359_ppy-mir-1302-4:mirbase
Length = 73
Score = 79.8 bits (40), Expect = 2e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 9 tttttaggacatgtatgtctggtgcaataattgggacatacttatgct 56
||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 10 tttttagtacatgtatgtctggtgcaacaattgggacatacttatgct 57
>27303_eca-mir-1302d-4:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 8e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 21 gtatgtctggtgcaataattgggacatacttatgct 56
|||||||| ||||||| ||||||||||||||||||
Sbjct: 40 gtatgtcttatgcaatatttgggacatacttatgct 75
>29159_hsa-mir-1302-1:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 caataattgggacatacttatgct 56
||||| ||||||||||||||||||
Sbjct: 69 caatatttgggacatacttatgct 92
>29166_hsa-mir-1302-6:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 caataattgggacatacttatgct 56
||||| ||||||||||||||||||
Sbjct: 50 caatatttgggacatacttatgct 73
>30714_ptr-mir-1302-1:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 caataattgggacatacttatgct 56
||||| ||||||||||||||||||
Sbjct: 69 caatatttgggacatacttatgct 92
>30719_ptr-mir-1302-6:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 caataattgggacatacttatgct 56
||||| ||||||||||||||||||
Sbjct: 50 caatatttgggacatacttatgct 73
>31358_ppy-mir-1302-3:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 caataattgggacatacttatgct 56
||||| ||||||||||||||||||
Sbjct: 50 caatatttgggacatacttatgct 73
>27301_eca-mir-1302b-2:mirbase
Length = 134
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 31 tgcaataattgggacatacttat 53
||||||| |||||||||||||||
Sbjct: 66 tgcaatatttgggacatacttat 88
