miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29160_hsa-mir-1302-10:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttta 138
||||||||||||||||||
Sbjct: 121 tcagaattaagcatttta 138
Score = 54.0 bits (27), Expect = 3e-08
Identities = 78/93 (83%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 25 agataaacaacgaataat--ttcgtagcataaatatgtcccaagcttagtttgggacata 82
||||||||||| |||||| || |||||||| |||||||||| || || ||||||||||
Sbjct: 115 agataaacaaccaataatgttttttagcataagtatgtcccaaactaagcttgggacata 56
Query: 83 cttatgctaaaaaacattattggttgtttatct 115
|||||||| ||| ||||| |||||||||||
Sbjct: 55 tttatgctacgaaa--ttattcgttgtttatct 25
>29161_hsa-mir-1302-11:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttta 138
||||||||||||||||||
Sbjct: 121 tcagaattaagcatttta 138
Score = 54.0 bits (27), Expect = 3e-08
Identities = 78/93 (83%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 25 agataaacaacgaataat--ttcgtagcataaatatgtcccaagcttagtttgggacata 82
||||||||||| |||||| || |||||||| |||||||||| || || ||||||||||
Sbjct: 115 agataaacaaccaataatgttttttagcataagtatgtcccaaactaagcttgggacata 56
Query: 83 cttatgctaaaaaacattattggttgtttatct 115
|||||||| ||| ||||| |||||||||||
Sbjct: 55 tttatgctacgaaa--ttattcgttgtttatct 25
>29162_hsa-mir-1302-2:mirbase
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttta 138
||||||||||||||||||
Sbjct: 121 tcagaattaagcatttta 138
Score = 54.0 bits (27), Expect = 3e-08
Identities = 78/93 (83%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 25 agataaacaacgaataat--ttcgtagcataaatatgtcccaagcttagtttgggacata 82
||||||||||| |||||| || |||||||| |||||||||| || || ||||||||||
Sbjct: 115 agataaacaaccaataatgttttttagcataagtatgtcccaaactaagcttgggacata 56
Query: 83 cttatgctaaaaaacattattggttgtttatct 115
|||||||| ||| ||||| |||||||||||
Sbjct: 55 tttatgctacgaaa--ttattcgttgtttatct 25
>29163_hsa-mir-1302-3:mirbase
Length = 138
Score = 258 bits (130), Expect = 1e-69
Identities = 136/138 (98%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatattt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttta 138
||| ||||||||||||||
Sbjct: 121 tcaaaattaagcatttta 138
Score = 50.1 bits (25), Expect = 4e-07
Identities = 85/103 (82%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 15 tttgaattttagataaacaacgaataa--tttcgtagcataaatatgtcccaagcttagt 72
||||||| | ||||||||||| ||||| ||| |||||||| |||||||||| || ||
Sbjct: 125 tttgaatctcagataaacaaccaataatgttttttagcataagtatgtcccaaactaagc 66
Query: 73 ttgggacatacttatgctaaaaaacattattggttgtttatct 115
|||||| ||| |||||||| || |||||| |||||||||||
Sbjct: 65 ttgggaaatatttatgctacgaa--attattcgttgtttatct 25
>30716_ptr-mir-1302-3:mirbase
Length = 137
Score = 256 bits (129), Expect = 4e-69
Identities = 135/137 (98%)
Strand = Plus / Plus
Query: 2 gatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgtc 61
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgcccagttagtttgaattttagataaacaacgaataatttcgtagcataaatatgtc 60
Query: 62 ccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagatt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagatt 120
Query: 122 cagaattaagcatttta 138
|| ||||||||||||||
Sbjct: 121 caaaattaagcatttta 137
Score = 58.0 bits (29), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 15 tttgaattttagataaacaacgaataa--tttcgtagcataaatatgtcccaagcttagt 72
||||||| | ||||||||||| ||||| ||| |||||||| |||||||||| || ||
Sbjct: 124 tttgaatctcagataaacaaccaataatgttttttagcataagtatgtcccaaactaagc 65
Query: 73 ttgggacatacttatgctaaaaaacattattggttgtttatct 115
|||||||||| |||||||| || |||||| |||||||||||
Sbjct: 64 ttgggacatatttatgctacgaa--attattcgttgtttatct 24
>30717_ptr-mir-1302-4:mirbase
Length = 137
Score = 256 bits (129), Expect = 4e-69
Identities = 135/137 (98%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcccagttagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttt 137
||| |||||||||||||
Sbjct: 121 tcaaaattaagcatttt 137
Score = 58.0 bits (29), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 15 tttgaattttagataaacaacgaataa--tttcgtagcataaatatgtcccaagcttagt 72
||||||| | ||||||||||| ||||| ||| |||||||| |||||||||| || ||
Sbjct: 125 tttgaatctcagataaacaaccaataatgttttttagcataagtatgtcccaaactaagc 66
Query: 73 ttgggacatacttatgctaaaaaacattattggttgtttatct 115
|||||||||| |||||||| || |||||| |||||||||||
Sbjct: 65 ttgggacatatttatgctacgaa--attattcgttgtttatct 25
>30718_ptr-mir-1302-5:mirbase
Length = 137
Score = 256 bits (129), Expect = 4e-69
Identities = 135/137 (98%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ggatgcccagttagtttgaattttagataaacaacgaataatttcttagcataaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttt 137
|||||||||||||||||
Sbjct: 121 tcagaattaagcatttt 137
Score = 61.9 bits (31), Expect = 1e-10
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 25 agataaacaacgaataat--ttcgtagcataaatatgtcccaagcttagtttgggacata 82
||||||||||| |||||| || |||||||| |||||||||| || || ||||||||||
Sbjct: 115 agataaacaaccaataatgttttttagcataagtatgtcccaaactaagcttgggacata 56
Query: 83 cttatgctaaaaaacattattggttgtttatct 115
||||||||| ||| ||||| |||||||||||
Sbjct: 55 tttatgctaagaaa--ttattcgttgtttatct 25
>30715_ptr-mir-1302-2:mirbase
Length = 137
Score = 248 bits (125), Expect = 9e-67
Identities = 134/137 (97%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgcccagttagtttgaattctagataaacaacgaataatttcgtagcataaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttt 137
||| |||||||||||||
Sbjct: 121 tcaaaattaagcatttt 137
Score = 58.0 bits (29), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 15 tttgaattttagataaacaacgaataa--tttcgtagcataaatatgtcccaagcttagt 72
||||||| | ||||||||||| ||||| ||| |||||||| |||||||||| || ||
Sbjct: 125 tttgaatctcagataaacaaccaataatgttttttagcataagtatgtcccaaactaagc 66
Query: 73 ttgggacatacttatgctaaaaaacattattggttgtttatct 115
|||||||||| |||||||| || |||||| |||||||||||
Sbjct: 65 ttgggacatatttatgctacgaa--attattcgttgtttatct 25
>31356_ppy-mir-1302-1:mirbase
Length = 137
Score = 240 bits (121), Expect = 2e-64
Identities = 133/137 (97%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
|||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 1 ggatgcccagttagtttgaattttagataaacaacgaataatttcttagcctaaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttt 137
||| |||||||||||||
Sbjct: 121 tcaaaattaagcatttt 137
Score = 58.0 bits (29), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 15 tttgaattttagataaacaacgaataa--tttcgtagcataaatatgtcccaagcttagt 72
||||||| | ||||||||||| ||||| ||| |||||||| |||||||||| || ||
Sbjct: 125 tttgaatctcagataaacaaccaataatgttttttagcataagtatgtcccaaactaagc 66
Query: 73 ttgggacatacttatgctaaaaaacattattggttgtttatct 115
|||||||||| ||| ||||| || |||||| |||||||||||
Sbjct: 65 ttgggacatatttaggctaagaa--attattcgttgtttatct 25
>31357_ppy-mir-1302-2:mirbase
Length = 137
Score = 240 bits (121), Expect = 2e-64
Identities = 133/137 (97%)
Strand = Plus / Plus
Query: 1 ggatgcccagctagtttgaattttagataaacaacgaataatttcgtagcataaatatgt 60
|||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 1 ggatgcccagttagtttgaattttagataaacaacgaataatttcttagcctaaatatgt 60
Query: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaagcttagtttgggacatacttatgctaaaaaacattattggttgtttatctgagat 120
Query: 121 tcagaattaagcatttt 137
||| |||||||||||||
Sbjct: 121 tcaaaattaagcatttt 137
Score = 58.0 bits (29), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 4/103 (3%)
Strand = Plus / Minus
Query: 15 tttgaattttagataaacaacgaataa--tttcgtagcataaatatgtcccaagcttagt 72
||||||| | ||||||||||| ||||| ||| |||||||| |||||||||| || ||
Sbjct: 125 tttgaatctcagataaacaaccaataatgttttttagcataagtatgtcccaaactaagc 66
Query: 73 ttgggacatacttatgctaaaaaacattattggttgtttatct 115
|||||||||| ||| ||||| || |||||| |||||||||||
Sbjct: 65 ttgggacatatttaggctaagaa--attattcgttgtttatct 25
>27303_eca-mir-1302d-4:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 57 tttgggacatacttatgctaaaaaa 81
>29166_hsa-mir-1302-6:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 55 tttgggacatacttatgctaaaaaa 79
>29168_hsa-mir-1302-8:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 65 tttgggacatacttatgctaaaaaa 89
>30719_ptr-mir-1302-6:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 55 tttgggacatacttatgctaaaaaa 79
>30721_ptr-mir-1302-8:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 65 tttgggacatacttatgctaaaaaa 89
>31358_ppy-mir-1302-3:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 55 tttgggacatacttatgctaaaaaa 79
>31360_ppy-mir-1302-5:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaaa 96
|||||||||||||||||||||||||
Sbjct: 65 tttgggacatacttatgctaaaaaa 89
>29159_hsa-mir-1302-1:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaa 95
||||||||||||||||||||||||
Sbjct: 74 tttgggacatacttatgctaaaaa 97
>29167_hsa-mir-1302-7:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 ttgggacatacttatgctaaaaaa 96
||||||||||||||||||||||||
Sbjct: 39 ttgggacatacttatgctaaaaaa 62
>30714_ptr-mir-1302-1:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaaa 95
||||||||||||||||||||||||
Sbjct: 74 tttgggacatacttatgctaaaaa 97
>30720_ptr-mir-1302-7:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 ttgggacatacttatgctaaaaaa 96
||||||||||||||||||||||||
Sbjct: 39 ttgggacatacttatgctaaaaaa 62
>31359_ppy-mir-1302-4:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 73 ttgggacatacttatgctaaaaaa 96
||||||||||||||||||||||||
Sbjct: 40 ttgggacatacttatgctaaaaaa 63
>29164_hsa-mir-1302-4:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaa 94
|||||||||||||||||||||||
Sbjct: 76 tttgggacatacttatgctaaaa 98
>29165_hsa-mir-1302-5:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 tttgggacatacttatgctaaaa 94
|||||||||||||||||||||||
Sbjct: 76 tttgggacatacttatgctaaaa 98
