miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31365_ppy-mir-1307:mirbase
Length = 149
Score = 295 bits (149), Expect = 5e-81
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 1 catcaagacccagctgagtcactgtcactgcctaccaatctcgaccggacctcgaccggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcaagacccagctgagtcactgtcactgcctaccaatctcgaccggacctcgaccggc 60
Query: 61 tcgtctgtgttgccaatcgactcggcgtggcgtcggtcgtggtagataggcggtcatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtctgtgttgccaatcgactcggcgtggcgtcggtcgtggtagataggcggtcatgca 120
Query: 121 tacgaattttcagctcttgttctggtgac 149
|||||||||||||||||||||||||||||
Sbjct: 121 tacgaattttcagctcttgttctggtgac 149
>30724_ptr-mir-1307:mirbase
Length = 148
Score = 293 bits (148), Expect = 2e-80
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 1 catcaagacccagctgagtcactgtcactgcctaccaatctcgaccggacctcgaccggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcaagacccagctgagtcactgtcactgcctaccaatctcgaccggacctcgaccggc 60
Query: 61 tcgtctgtgttgccaatcgactcggcgtggcgtcggtcgtggtagataggcggtcatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtctgtgttgccaatcgactcggcgtggcgtcggtcgtggtagataggcggtcatgca 120
Query: 121 tacgaattttcagctcttgttctggtga 148
||||||||||||||||||||||||||||
Sbjct: 121 tacgaattttcagctcttgttctggtga 148
>33488_bta-mir-1307:mirbase
Length = 149
Score = 192 bits (97), Expect = 5e-50
Identities = 127/137 (92%)
Strand = Plus / Plus
Query: 13 gctgagtcactgtcactgcctaccaatctcgaccggacctcgaccggctcgtctgtgttg 72
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 13 gctgagtcactgccactgcctaccaatctcgaccggacctcgaccggctcgtctatattg 72
Query: 73 ccaatcgactcggcgtggcgtcggtcgtggtagataggcggtcatgcatacgaattttca 132
||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct: 73 ccaatcgactcggcgtggcgtcggtcgtggtagataggcggtcatacagacgagttttca 132
Query: 133 gctcttgttctggtgac 149
| ||| |||||||||
Sbjct: 133 agtgttgctctggtgac 149
>34147_ssc-mir-1307:mirbase
Length = 80
Score = 151 bits (76), Expect = 2e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 32 ctaccaatctcgaccggacctcgaccggctcgtctgtgttgccaatcgactcggcgtggc 91
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctaccaatctcgaccggacctcgaccggctcgtctatgttgccaatcgactcggcgtggc 60
Query: 92 gtcggtcgtggtagataggc 111
||||||||||||||||||||
Sbjct: 61 gtcggtcgtggtagataggc 80
>26915_cfa-mir-1307:mirbase
Length = 60
Score = 111 bits (56), Expect = 1e-25
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 42 cgaccggacctcgaccggctcgtctgtgttgccaatcgactcggcgtggcgtcggtcgtg 101
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaccggacctcgaccggctcgtctatgttgccaatcgactcggcgtggcgtcggtcgtg 60
