miRNEST 2.0, an integrative microRNA resource :: BLAST
>48834_osa-miR162a:pmrd
Length = 171
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 87 ggaatcgatcgataaacctctgcatccagt 116
||||||||||||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccagt 164
>54387_rco-miR162:pmrd
Length = 96
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 68 gaatcgatcgataaacctctgcatccag 95
>48682_llu-miR162:pmrd
Length = 80
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 53 gaatcgatcgataaacctctgcatccag 80
>48545_gma-miR162a:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccag 93
>48493_ghr-miR162a:pmrd
Length = 148
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccag 114
>48423_cpa-miR162a:pmrd
Length = 109
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatccag 100
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccag 15
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 tggagtcagcggttcatcgatcagttcct 51
||||| ||||||||||||||||| |||||
Sbjct: 101 tggaggcagcggttcatcgatcaattcct 73
>46938_ath-miR162b:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tggagtcagcggttcatcgatcagttcct 51
||||| ||||||||||||||||| |||||
Sbjct: 13 tggaggcagcggttcatcgatcaattcct 41
>54542_sly-miR162:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 aggaatcgatcgataaacctctgcatccag 115
|||||||| |||||||||||||||||||||
Sbjct: 70 aggaatcggtcgataaacctctgcatccag 99
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 cgatcgataaacctctgcatccagtg 117
||||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccagtg 5
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 cgatcgataaacctctgcatccagtg 117
||||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccagtg 7
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 cgatcgataaacctctgcatccagtg 117
||||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccagtg 7
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 cgatcgataaacctctgcatccagtg 117
||||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccagtg 5
>51618_ptc-miR162c:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 92 cgatcgataaacctctgcatccagtg 117
||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagtg 100
>51617_ptc-miR162b:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 92 cgatcgataaacctctgcatccagtg 117
||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagtg 100
>48836_osa-miR162m:pmrd
Length = 114
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 aggaatcgatcgataaacctctgcatccag 115
|||||||||||||||| |||||||||||||
Sbjct: 85 aggaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 aggaatcgatcgataaacctctgcatccag 115
|||||||||||||||| |||||||||||||
Sbjct: 95 aggaatcgatcgataagcctctgcatccag 124
>54948_zma-miR162b:pmrd
Length = 130
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 87 ggaatcgatcgataaacctctgcatccag 115
||||||| |||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130
>54784_vvi-miR162:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 92 cgatcgataaacctctgcatccag 115
||||||||||||||||||||||||
Sbjct: 31 cgatcgataaacctctgcatccag 8
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 92 cgatcgataaacctctgcatccag 115
||||||||||||||||||||||||
Sbjct: 31 cgatcgataaacctctgcatccag 8
>51616_ptc-miR162a:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cgatcgataaacctctgcatccag 115
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>48707_mtr-miR162d:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
|||||| |||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>46937_ath-miR162a:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
|||| |||||||||||||||||||||||
Sbjct: 82 gaatagatcgataaacctctgcatccag 109
>48706_mtr-miR162c:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 88 gaatcgatcgataaacctctgcatcca 114
|||||| ||||||||||||||||||||
Sbjct: 27 gaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatcca 114
|||||| ||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>48685_lsa-miR162:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 95 tcgataaacctctgcatccag 115
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
>48546_gma-miR162m:pmrd
Length = 367
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 95 tcgataaacctctgcatccag 115
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
>48690_mdo-miR162:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 88 gaatcgatcgataaacctctgcatccag 115
|||||| ||||||||||| |||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatccag 88
