miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27898_mml-mir-423:mirbase
Length = 94
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>27899_mml-mir-423:mirbase
Length = 94
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>28645_hsa-mir-423:mirbase
Length = 94
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>28646_hsa-mir-423:mirbase
Length = 94
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>30370_ptr-mir-423:mirbase
Length = 93
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>30999_ppy-mir-423:mirbase
Length = 90
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 19
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 18 ccctcagcctaactt 4
>31000_ppy-mir-423:mirbase
Length = 90
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 19
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 18 ccctcagcctaactt 4
>32066_mmu-mir-423:mirbase
Length = 109
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 35
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 34 ccctcagcctaactt 20
>32067_mmu-mir-423:mirbase
Length = 109
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 35
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 34 ccctcagcctaactt 20
>32908_rno-mir-423:mirbase
Length = 79
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 17
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 16 ccctcagcctaactt 2
>33367_bta-mir-423:mirbase
Length = 94
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>33368_bta-mir-423:mirbase
Length = 94
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 23
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 22 ccctcagcctaactt 8
>34089_ssc-mir-423:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 16
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 15 ccctcagcctaactt 1
>34090_ssc-mir-423:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgc 16
Query: 61 ccctcagcctaactt 75
|||||||||||||||
Sbjct: 15 ccctcagcctaactt 1
>27173_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 8 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 4
Query: 68 cct 70
|||
Sbjct: 3 cct 1
>27174_eca-mir-423:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 8 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctcag 4
Query: 68 cct 70
|||
Sbjct: 3 cct 1
>26840_cfa-mir-423a:mirbase
Length = 59
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Minus
Query: 8 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctca 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 actgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctctgcccctca 1
