miRNEST 2.0, an integrative microRNA resource :: BLAST
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 67.9 bits (34), Expect = 2e-12
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 23 tgcctggctccatgtatgacattttcagagaccatcggtatttccaatggcctccgtgaa 82
||||||||||| |||||| ||||| ||||| ||| |||| ||| | ||||||||||| |
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcga-tggcctccgtgga 69
Query: 83 tggcgtatgaggagcctagcatattc 108
|||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 4e-10
Identities = 73/86 (84%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 23 tgcctggctccatgtatgacattttcagagaccatcggtatttccaatggcctccgtgaa 82
||||||||||| |||||| ||||| ||||| ||| ||| || | |||||||||||| |
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaacgg-atcctcgatggcctccgtgga 69
Query: 83 tggcgtatgaggagcctagcatattc 108
|||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95
>41219_csi-MIR160:mirbase
Length = 143
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 69 atggcctccgtgaatggcgtatgaggagcctagcatattcca 110
|||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 78 atggcctccgtggatggcgtatgaggagccatgcatattcca 119
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 81/97 (83%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 19 tatatgcctggctccatgtatgacattttcagagaccatcggtatttccaatggcctccg 78
||||||||||||||| |||||| ||||| ||||| ||| ||| | | | ||||||| ||
Sbjct: 7 tatatgcctggctccctgtatgccatttgcagagcccaccggcacat-cgatggccttcg 65
Query: 79 tgaatggcgtatgaggagcctagcatattccacatct 115
|| ||||||||||||||||| |||||| || |||||
Sbjct: 66 tggatggcgtatgaggagccatgcatatgccccatct 102
>41529_sly-MIR160a:mirbase
Length = 129
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 tgaatggcgtatgaggagcctagcatattcc 109
|||||||||||||||||||| ||||||||||
Sbjct: 78 tgaatggcgtatgaggagccaagcatattcc 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 18 gtatatgcctggctccatgtatgacattt 46
|||||||||||||||| |||||| |||||
Sbjct: 15 gtatatgcctggctccctgtatgccattt 43
>40312_bra-MIR160a:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 73 cctccgtgaatggcgtatgaggagcctagcatatt 107
|||||||||||||||||||||||||| |||||||
Sbjct: 74 cctccgtgaatggcgtatgaggagccatgcatatt 108
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 atggcgtatgaggagcctagcatattcc 109
||||||||||||||||| ||||||||||
Sbjct: 64 atggcgtatgaggagccaagcatattcc 91
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 atggcgtatgaggagcctagcatattcc 109
||||||||||||||||| ||||||||||
Sbjct: 64 atggcgtatgaggagccaagcatattcc 91
>40436_gma-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 atggcgtatgaggagcctagcatatt 107
||||||||||||||||| ||||||||
Sbjct: 79 atggcgtatgaggagccaagcatatt 104
>40019_ath-MIR160a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 73 cctccgtgaatggcgtatgaggagcc 98
|||||||| |||||||||||||||||
Sbjct: 52 cctccgtggatggcgtatgaggagcc 77
>39807_aly-MIR160a:mirbase
Length = 158
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 73 cctccgtgaatggcgtatgaggagcc 98
|||||||| |||||||||||||||||
Sbjct: 90 cctccgtggatggcgtatgaggagcc 115
