miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P0C884|SCL34_ARATH Scarecrow-like protein 34 OS=Arabidopsis
           thaliana GN=SCL34 PE=3 SV=1
          Length = 630

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVPA 86
           FV DE+ KW+LQGWKGR LYASSCWVPA
Sbjct: 603 FVVDENSKWLLQGWKGRTLYASSCWVPA 630




>sp|Q3EDH0|SCL31_ARATH Scarecrow-like protein 31 OS=Arabidopsis
           thaliana GN=SCL31 PE=2 SV=2
          Length = 662

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVPA 86
           FV DED  W LQGWKGRIL++SSCWVP+
Sbjct: 635 FVLDEDSNWFLQGWKGRILFSSSCWVPS 662




>sp|Q9LTI5|SCL11_ARATH Scarecrow-like protein 11 OS=Arabidopsis
           thaliana GN=SCL11 PE=2 SV=1
          Length = 610

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVPA 86
           FV D D  W+LQGWKGR++YA SCW PA
Sbjct: 573 FVIDSDNNWMLQGWKGRVIYAFSCWKPA 600




>sp|Q9SNB8|SCL30_ARATH Scarecrow-like protein 30 OS=Arabidopsis
           thaliana GN=SCL30 PE=2 SV=1
          Length = 583

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVPA 86
           FV D D  W+ QGWKGR+LYA SCW PA
Sbjct: 554 FVIDNDNHWMFQGWKGRVLYAVSCWKPA 581




>sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14 OS=Arabidopsis
           thaliana GN=SCL14 PE=2 SV=2
          Length = 769

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVPA 86
           F  D++G W+LQGWKGRI+YASS WVP+
Sbjct: 740 FDVDQNGNWLLQGWKGRIVYASSLWVPS 767




>sp|P0C883|SCL33_ARATH Scarecrow-like protein 33 OS=Arabidopsis
           thaliana GN=SCL33 PE=3 SV=1
          Length = 694

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVP 83
           F  D+D  W+LQGWKGRI+Y SS WVP
Sbjct: 667 FDVDQDCHWLLQGWKGRIVYGSSIWVP 693




>sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis
           thaliana GN=SCL9 PE=2 SV=1
          Length = 718

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +3

Query: 3   FVFDEDGKWILQGWKGRILYASSCWVP 83
           FV D+D +W+LQGWKGR + A S W P
Sbjct: 688 FVIDQDNRWLLQGWKGRTVMALSVWKP 714