miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 63.9 bits (32), Expect = 5e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagaggatctgagtgggaagatagtgctgctggcttatggat 93
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Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctacacc 203
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Sbjct: 163 ggattgaagggagctctacacc 184
>40338_rco-MIR159:mirbase
Length = 180
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagaggatct 61
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Sbjct: 6 gagctccttgaagtccaatagaggatct 33
Score = 48.1 bits (24), Expect = 3e-06
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 116 ttttgtataggctttgtggcttgcataacccaggagctttattacctt 163
||||| |||||||| |||||||||||| | ||||||||| ||||||||
Sbjct: 94 ttttggataggctt-gtggcttgcatatctcaggagcttcattacctt 140
>40432_gma-MIR159a:mirbase
Length = 214
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 28 gaagtagagctccttgaagtccaatagaggatct 61
||||| ||||||||||||||||||| ||||||||
Sbjct: 17 gaagtggagctccttgaagtccaattgaggatct 50
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctacaccct 205
||||||||||||||||||||||||
Sbjct: 178 ggattgaagggagctctacaccct 201
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagagg 57
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagagg 57
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagaggatct 61
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagaggatct 61
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctacacc 203
||||||||||||||||||||||
Sbjct: 161 ggattgaagggagctctacacc 182
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaataga 55
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Sbjct: 13 gagctccttgaagtccaataga 34
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggcttgcataacccaggagctttattacct 162
|||||||||| | |||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacct 142
>39804_aly-MIR159a:mirbase
Length = 222
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tggaagtagagctccttgaagt 47
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Sbjct: 15 tggaagtagagctccttgaagt 36
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctaca 201
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Sbjct: 186 ggattgaagggagctctaca 205
>40397_ahy-MIR159:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagaggatctgagtgggaagatagtgctgct 82
|||||||||||||||||| ||||| ||| ||||| |||| | ||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgct 53
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctaca 201
||||||||||||||||||||
Sbjct: 160 ggattgaagggagctctaca 179
>41218_csi-MIR159:mirbase
Length = 216
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 34 gagctccttgaagtccaatagagg 57
|||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctaca 201
||||||||||||||||||||
Sbjct: 155 ggattgaagggagctctaca 174
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctaca 201
||||||||||||||||||||
Sbjct: 166 ggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 182 ggattgaagggagctctaca 201
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Sbjct: 164 ggattgaagggagctctaca 183
