miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45749_miR162:micropc
Length = 99
Score = 196 bits (99), Expect = 3e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 21 ttggagtcagcggtttatcgatcagttccttttaacaaacgcatgaacaagagagagcga 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggagtcagcggtttatcgatcagttccttttaacaaacgcatgaacaagagagagcga 60
Query: 81 gcgtaaaagaggaatcgatcgataaacctctgcatccag 119
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgtaaaagaggaatcgatcgataaacctctgcatccag 99
>46090_miR162:micropc
Length = 97
Score = 192 bits (97), Expect = 5e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 22 tggagtcagcggtttatcgatcagttccttttaacaaacgcatgaacaagagagagcgag 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagtcagcggtttatcgatcagttccttttaacaaacgcatgaacaagagagagcgag 60
Query: 82 cgtaaaagaggaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtaaaagaggaatcgatcgataaacctctgcatcca 97
>45901_miR162:micropc
Length = 111
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||||
Sbjct: 82 aggaatcgatcgataaacctctgcatccag 111
>46457_miR162:micropc
Length = 109
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||||
Sbjct: 81 aggaatcgatcgataaacctctgcatcca 109
>45991_miR162:micropc
Length = 108
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 91 ggaatcgatcgataaacctctgcatccag 119
|||||||||||||||||||||||||||||
Sbjct: 80 ggaatcgatcgataaacctctgcatccag 108
>46817_miR162:micropc
Length = 93
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccag 93
>46676_miR162:micropc
Length = 97
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 70 gaatcgatcgataaacctctgcatccag 97
>46549_miR162:micropc
Length = 92
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatccag 92
>46039_miR162:micropc
Length = 92
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatccag 92
>45545_miR162:micropc
Length = 91
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatccag 91
>44934_miR162:micropc
Length = 97
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
||||||||||||||||||||||||||||
Sbjct: 70 gaatcgatcgataaacctctgcatccag 97
>44845_miR162:micropc
Length = 106
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 ggaatcgatcgataaacctctgcatcca 118
||||||||||||||||||||||||||||
Sbjct: 79 ggaatcgatcgataaacctctgcatcca 106
>46597_miR162:micropc
Length = 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
>46511_miR162:micropc
Length = 89
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||
Sbjct: 63 gaatcgatcgataaacctctgcatcca 89
>46504_miR162:micropc
Length = 90
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
>46394_miR162:micropc
Length = 95
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>46364_miR162:micropc
Length = 95
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>45903_miR162:micropc
Length = 90
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||||||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
>46628_miR162:micropc
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
|||||||| |||||||||||||||||||||
Sbjct: 107 aggaatcggtcgataaacctctgcatccag 136
>46169_miR162:micropc
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
|||||||| |||||||||||||||||||||
Sbjct: 107 aggaatcggtcgataaacctctgcatccag 136
>45279_miR162:micropc
Length = 114
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
|||||||||||||||| |||||||||||||
Sbjct: 85 aggaatcgatcgataagcctctgcatccag 114
>45084_miR162:micropc
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
|||||||| |||||||||||||||||||||
Sbjct: 107 aggaatcggtcgataaacctctgcatccag 136
>44890_miR162:micropc
Length = 141
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
|||||||| |||||||||||||||||||||
Sbjct: 112 aggaatcggtcgataaacctctgcatccag 141
>44807_miR162:micropc
Length = 141
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatccag 119
|||||||| |||||||||||||||||||||
Sbjct: 112 aggaatcggtcgataaacctctgcatccag 141
>46470_miR162:micropc
Length = 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||| ||||||||||||||||||||
Sbjct: 107 aggaatcggtcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||| ||||||||||||||||||||
Sbjct: 107 aggaatcggtcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||| ||||||||||||||||||||
Sbjct: 107 aggaatcggtcgataaacctctgcatcca 135
>45416_miR162:micropc
Length = 139
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||| ||||||||||||||||||||
Sbjct: 111 aggaatcggtcgataaacctctgcatcca 139
>45338_miR162:micropc
Length = 112
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||||||||||| ||||||||||||
Sbjct: 84 aggaatcgatcgataagcctctgcatcca 112
>45197_miR162:micropc
Length = 139
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 aggaatcgatcgataaacctctgcatcca 118
|||||||| ||||||||||||||||||||
Sbjct: 111 aggaatcggtcgataaacctctgcatcca 139
>46456_miR162:micropc
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 cgatcgataaacctctgcatccag 119
||||||||||||||||||||||||
Sbjct: 66 cgatcgataaacctctgcatccag 89
>46096_miR162:micropc
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
|||||| |||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>46026_miR162:micropc
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
|||||| |||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>45617_miR162:micropc
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
|||||| |||||||||||||||||||||
Sbjct: 61 gaatcggtcgataaacctctgcatccag 88
>44984_miR162:micropc
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatccag 119
|||||| |||||||||||||||||||||
Sbjct: 58 gaatcggtcgataaacctctgcatccag 85
>46792_miR162:micropc
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||| ||||||||||||||||||||
Sbjct: 57 gaatcggtcgataaacctctgcatcca 83
>46557_miR162:micropc
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||| ||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>45921_miR162:micropc
Length = 110
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatccag 110
>45757_miR162:micropc
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||| ||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>45283_miR162:micropc
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 cgatcgataaacctctgcatcca 118
|||||||||||||||||||||||
Sbjct: 65 cgatcgataaacctctgcatcca 87
>44920_miR162:micropc
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 gaatcgatcgataaacctctgcatcca 118
|||||| ||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>45508_miR162:micropc
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatcca 108
