miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>44789_miR156:micropc
          Length = 84

 Score =  167 bits (84), Expect = 2e-42
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                      
Query: 12 ttgacagaagagagggagcattcatagttcttgcatgaaagaaatcatgcttgaatttat 71
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagggagcattcatagttcttgcatgaaagaaatcatgcttgaatttat 60

                                  
Query: 72 gtatgctctctttctatctgtcag 95
          ||||||||||||||||||||||||
Sbjct: 61 gtatgctctctttctatctgtcag 84




>45293_miR156:micropc
          Length = 82

 Score =  163 bits (82), Expect = 3e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgacagaagagagggagcattcatagttcttgcatgaaagaaatcatgcttgaatttatg 72
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgacagaagagagggagcattcatagttcttgcatgaaagaaatcatgcttgaatttatg 60

                                
Query: 73 tatgctctctttctatctgtca 94
          ||||||||||||||||||||||
Sbjct: 61 tatgctctctttctatctgtca 82




>44985_miR156:micropc
          Length = 80

 Score =  159 bits (80), Expect = 5e-40
 Identities = 80/80 (100%)
 Strand = Plus / Plus

                                                                      
Query: 14 gacagaagagagggagcattcatagttcttgcatgaaagaaatcatgcttgaatttatgt 73
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gacagaagagagggagcattcatagttcttgcatgaaagaaatcatgcttgaatttatgt 60

                              
Query: 74 atgctctctttctatctgtc 93
          ||||||||||||||||||||
Sbjct: 61 atgctctctttctatctgtc 80