miRNEST 2.0, an integrative microRNA resource :: BLAST
>40470_gma-MIR393:mirbase
Length = 120
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatcccaaatc 50
||||||||||||||||||||||||||||||||||||
Sbjct: 3 aggaggcatccaaagggatcgcattgatcccaaatc 38
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 91 ttgggatcatgctatctctttggatttctcctt 123
|||||||||||||||| ||||||||||||||||
Sbjct: 87 ttgggatcatgctatccctttggatttctcctt 119
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatcccaaa 48
||||||||||||||||||||||||||||||||||
Sbjct: 3 aggaggcatccaaagggatcgcattgatcccaaa 36
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 94 ggatcatgctatctctttggatttctcctt 123
||||||||||||| ||||||||| ||||||
Sbjct: 51 ggatcatgctatccctttggattcctcctt 80
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 18 aggcatccaaagggatcgcattgatcccaaatct 51
||||||||||||||||||||||||||||||||||
Sbjct: 1 aggcatccaaagggatcgcattgatcccaaatct 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 ttgggatcatgctatctctttggatt 116
|||||||||||||||| |||||||||
Sbjct: 91 ttgggatcatgctatccctttggatt 116
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatcccaa 47
|||||||||||||||||||||||||||||||||
Sbjct: 3 aggaggcatccaaagggatcgcattgatcccaa 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 94 ggatcatgctatctctttggatttctcct 122
||||||||||||| ||||||||| |||||
Sbjct: 57 ggatcatgctatccctttggattcctcct 85
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatccc 45
|||||||||||||||||||||||||||||||
Sbjct: 3 aggaggcatccaaagggatcgcattgatccc 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 94 ggatcatgctatctctttggatttctcct 122
||||||||||||| ||||||||| |||||
Sbjct: 56 ggatcatgctatccctttggattcctcct 84
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatcc 44
||||||||||||||||||||||||||||||
Sbjct: 13 aggaggcatccaaagggatcgcattgatcc 42
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 94 ggatcatgctatctctttggatttctccttcggtt 128
||||||||||||| ||||||||| |||||| ||||
Sbjct: 78 ggatcatgctatccctttggattcctcctttggtt 112
>40706_mtr-MIR393:mirbase
Length = 135
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatcc 44
||||||||||||||||||||||||||||||
Sbjct: 13 aggaggcatccaaagggatcgcattgatcc 42
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 91 ttgggatcatgctatctctttggatttctcctt 123
|||||||||||| ||| ||||||||||||||||
Sbjct: 93 ttgggatcatgccatccctttggatttctcctt 125
>42566_sbi-MIR393:mirbase
Length = 139
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 aggaggcatccaaagggatcgcattgatcc 44
|||| |||||||||||||||||||||||||
Sbjct: 12 aggaagcatccaaagggatcgcattgatcc 41
>39865_aly-MIR393a:mirbase
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 94 ggatcatgctatctctttggatttctccttcggt 127
||||||||||||||||||||||| |||||||||
Sbjct: 110 ggatcatgctatctctttggattcatccttcggt 143
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atccaaagggatcgcattgatcc 44
|||||||||||||||||||||||
Sbjct: 17 atccaaagggatcgcattgatcc 39
>41997_osa-MIR393:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gcatccaaagggatcgcattgatcc 44
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gcatccaaagggatcgcattgatcc 44
|||||||||||||||||||||||||
Sbjct: 33 gcatccaaagggatcgcattgatcc 57
>39866_aly-MIR393b:mirbase
Length = 169
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gcatccaaagggatcgcattgatcc 44
|||||||||||||||||||||||||
Sbjct: 15 gcatccaaagggatcgcattgatcc 39
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatccca 46
||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatccca 34
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atccaaagggatcgcattgatcc 44
|||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcc 42
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atccaaagggatcgcattgatcc 44
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>40075_ath-MIR393a:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 atccaaagggatcgcattgatcc 44
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 ggatcatgctatctctttggatt 116
|||||||||||||||||||||||
Sbjct: 103 ggatcatgctatctctttggatt 125
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatcc 44
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatcc 44
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
