miRNEST 2.0, an integrative microRNA resource :: BLAST
>27682_mml-mir-30b:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
Query: 61 ggtggatgtttacttcagctgacttgga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtggatgtttacttcagctgacttgga 88
>28191_mne-mir-30b:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
Query: 61 ggtggatgtttacttcagctgacttgga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtggatgtttacttcagctgacttgga 88
>28392_hsa-mir-30b:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
Query: 61 ggtggatgtttacttcagctgacttgga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtggatgtttacttcagctgacttgga 88
>30178_ptr-mir-30b:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
Query: 61 ggtggatgtttacttcagctgacttgga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtggatgtttacttcagctgacttgga 88
>30783_ppy-mir-30b:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
Query: 61 ggtggatgtttacttcagctgacttgga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtggatgtttacttcagctgacttgga 88
>28280_ggo-mir-30b:mirbase
Length = 88
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1 accaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagttccagttcatgtaaacatcctacactcagctgtaatacatggattggctggga 60
Query: 61 ggtggatgtttacttcagctgacttgga 88
||||||||||||||||||||||||||||
Sbjct: 61 ggtggatgtttacttcagctgacttgga 88
>27495_age-mir-30b:mirbase
Length = 88
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 5 agtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 agtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgagaggtg 64
Query: 65 gatgtttacttcagctgacttgga 88
||||||||||||||||||||||||
Sbjct: 65 gatgtttacttcagctgacttgga 88
>27555_lla-mir-30b:mirbase
Length = 88
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 5 agtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 agtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgagaggtg 64
Query: 65 gatgtttacttcagctgacttgga 88
||||||||||||||||||||||||
Sbjct: 65 gatgtttacttcagctgacttgga 88
>33940_ssc-mir-30b:mirbase
Length = 76
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 7 tttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtgga 66
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcagttcgtgtaaacatcctacactcagctgtaatacatggattggctgggaggtgga 60
Query: 67 tgtttacttcagctga 82
||||||||||||||||
Sbjct: 61 tgtttacttcagctga 76
>33941_ssc-mir-30b:mirbase
Length = 76
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 7 tttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtgga 66
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcagttcgtgtaaacatcctacactcagctgtaatacatggattggctgggaggtgga 60
Query: 67 tgtttacttcagctga 82
||||||||||||||||
Sbjct: 61 tgtttacttcagctga 76
>31807_mmu-mir-30b:mirbase
Length = 96
Score = 125 bits (63), Expect = 6e-30
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 2 ccaagtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggag 61
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 6 ccaagtttcagttcatgtaaacatcctacactcagctgtcatacatgcgttggctgggat 65
Query: 62 gtggatgtttacttcagctgacttgga 88
|||||||||||| ||||||| ||||||
Sbjct: 66 gtggatgtttacgtcagctgtcttgga 92
>33165_bta-mir-30b:mirbase
Length = 88
Score = 123 bits (62), Expect = 2e-29
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 7 tttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtgga 66
|||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||
Sbjct: 7 tttcagttcatgtaaacatcctacactcagctgtaacacacgagtcggctgggaggtgga 66
Query: 67 tgtttacttcagctgacttgga 88
||||||||||||||||||||||
Sbjct: 67 tgtttacttcagctgacttgga 88
>33166_bta-mir-30b:mirbase
Length = 88
Score = 123 bits (62), Expect = 2e-29
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 7 tttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtgga 66
|||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||
Sbjct: 7 tttcagttcatgtaaacatcctacactcagctgtaacacacgagtcggctgggaggtgga 66
Query: 67 tgtttacttcagctgacttgga 88
||||||||||||||||||||||
Sbjct: 67 tgtttacttcagctgacttgga 88
>32688_rno-mir-30b:mirbase
Length = 87
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 5 agtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtg 64
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||
Sbjct: 4 agtttcagttcatgtaaacatcctacactcagctgtcatacatgagttggctgggatgtg 63
Query: 65 gatgtttacttcagctgacttgga 88
||||||||| ||||||| ||||||
Sbjct: 64 gatgtttacgtcagctgtcttgga 87
>32689_rno-mir-30b:mirbase
Length = 87
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 5 agtttcagttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtg 64
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||
Sbjct: 4 agtttcagttcatgtaaacatcctacactcagctgtcatacatgagttggctgggatgtg 63
Query: 65 gatgtttacttcagctgacttgga 88
||||||||| ||||||| ||||||
Sbjct: 64 gatgtttacgtcagctgtcttgga 87
>26654_cfa-mir-30b:mirbase
Length = 60
Score = 111 bits (56), Expect = 8e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 17 tgtaaacatcctacactcagctgtaatacatggattggctgggaggtggatgtttacttc 76
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctacactcagctgtagtacatggattggctgggaggtggatgtttacttc 60
>26975_eca-mir-30b:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 17 tgtaaacatcctacactcagctgtaatacatggattggctgggaggtggatgtttact 74
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctacactcagctgtactacatggattggctgggaggtggatgtttact 58
>25917_gga-mir-30b:mirbase
Length = 87
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 11 agttcatgtaaacatcctacactcagctgtaatacatggattggctgggaggtggatgtt 70
||||| |||||||||||||||||||||| ||| | ||| ||||||| ||||||||||
Sbjct: 10 agttcctgtaaacatcctacactcagctataacaagtggtagggctggggggtggatgtt 69
Query: 71 tacttcagctgacttgga 88
||||||| ||||||||||
Sbjct: 70 tacttcaactgacttgga 87
>31451_oan-mir-30b:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 agttcatgtaaacatcctacactcagctgt 40
||||||||||||||||||||||||||||||
Sbjct: 23 agttcatgtaaacatcctacactcagctgt 52
>34248_dre-mir-30b:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgtaaacatcctacactcagctgt 40
||||||||||||||||||||||||
Sbjct: 16 tgtaaacatcctacactcagctgt 39
>34573_fru-mir-30b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgtaaacatcctacactcagctgt 40
||||||||||||||||||||||||
Sbjct: 16 tgtaaacatcctacactcagctgt 39
>34720_tni-mir-30b:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgtaaacatcctacactcagctgt 40
||||||||||||||||||||||||
Sbjct: 7 tgtaaacatcctacactcagctgt 30
>25733_xtr-mir-30b:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 atgtaaacatcctacactcagct 38
|||||||||||||||||||||||
Sbjct: 11 atgtaaacatcctacactcagct 33
