miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45310_miR157:micropc
Length = 85
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcgg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcgg 60
Query: 71 gagtgtgctctctttacttctgtc 94
||||||||||||||||||||||||
Sbjct: 61 gagtgtgctctctttacttctgtc 84
>45619_miR156:micropc
Length = 84
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcggg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcggg 60
Query: 72 agtgtgctctctttacttctgtc 94
|||||||||||||||||||||||
Sbjct: 61 agtgtgctctctttacttctgtc 83
>45727_miR156:micropc
Length = 78
Score = 155 bits (78), Expect = 7e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 15 cagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcgggagt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaagaaagagagcacaagccgggattagcaaatataaagttttgcccttgtcgggagt 60
Query: 75 gtgctctctttacttctg 92
||||||||||||||||||
Sbjct: 61 gtgctctctttacttctg 78
>46205_miR157:micropc
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ttgacagaagaaagagagcacaa 33
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagaaagagagcacaa 23
>45433_miR156:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgacagaagaaagagagcacaa 33
||||||||||||||||||||||
Sbjct: 1 tgacagaagaaagagagcacaa 22
>46600_miR156:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 13 gacagaagaaagagagcacaagccggga 40
||||||||| ||||||||||| ||||||
Sbjct: 1 gacagaagagagagagcacaacccggga 28
