miRNEST 2.0, an integrative microRNA resource :: BLAST
>27657_mml-mir-18b:mirbase
Length = 71
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 61 cccatctggc 70
||| ||||||
Sbjct: 61 cccttctggc 70
>28366_hsa-mir-18b:mirbase
Length = 71
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 61 cccatctggc 70
||| ||||||
Sbjct: 61 cccttctggc 70
>30758_ppy-mir-18b:mirbase
Length = 71
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
Query: 61 cccatctggc 70
||| ||||||
Sbjct: 61 cccttctggc 70
>33918_ssc-mir-18b:mirbase
Length = 83
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 65
Query: 61 cccatctggc 70
||| ||||||
Sbjct: 66 cccttctggc 75
>26951_eca-mir-18b:mirbase
Length = 59
Score = 115 bits (58), Expect = 4e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgcccc 58
>31432_oan-mir-18:mirbase
Length = 130
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 24 tgtgttaaggtgcatctagtgcagttagtgaagtagcttagaatctactgccctaaatgc 83
Query: 61 cccatctggc 70
|| ||||||
Sbjct: 84 tccttctggc 93
>33135_bta-mir-18b:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3 tgtgttaaggtgcatctagtgcagttagtgaagcagctcagaatctactgccctaaatgc 62
Query: 61 cccatctggc 70
|| ||||||
Sbjct: 63 tccttctggc 72
>26629_cfa-mir-18b:mirbase
Length = 77
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 3 tgtgttaaggtgcatctagtgcagttagtgaagccgcttagaacctactgccctaaatgc 62
Query: 61 ccc 63
|||
Sbjct: 63 ccc 65
>31781_mmu-mir-18b:mirbase
Length = 83
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 6 tgtgttaaggtgcatctagtgctgttagtgaagcagcttacaatctactgccctaaatgc 65
Query: 61 ccc 63
|||
Sbjct: 66 ccc 68
>25900_gga-mir-18b:mirbase
Length = 84
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||
Sbjct: 10 tgtgttaaggtgcatctagtgcagttagtgacgtagcgtagaatctactgccctaaatgc 69
Query: 61 cccatctggc 70
|| ||||||
Sbjct: 70 tccttctggc 79
>25656_xla-mir-18:mirbase
Length = 79
Score = 79.8 bits (40), Expect = 2e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 4 tgtgttaaggtgcatctagtgcagttagtgacatagcgtagcatctactgccctaaatgc 63
>25705_xtr-mir-18a:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggc 70
|||||
Sbjct: 74 ctggc 78
>25899_gga-mir-18a:mirbase
Length = 93
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggc 70
|||||
Sbjct: 74 ctggc 78
>26628_cfa-mir-18a:mirbase
Length = 92
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggc 70
|||||
Sbjct: 74 ctggc 78
>27337_mdo-mir-18:mirbase
Length = 72
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 7 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 66
Query: 66 ctggc 70
|||||
Sbjct: 67 ctggc 71
>27483_age-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>27544_lla-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>27592_sla-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>27656_mml-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>28175_mne-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>28263_ggo-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>28365_hsa-mir-18a:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>30047_ppa-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>30152_ptr-mir-18a:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>30757_ppy-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>31397_lca-mir-18:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>33134_bta-mir-18a:mirbase
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 6 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 65
Query: 66 ctggc 70
|||||
Sbjct: 66 ctggc 70
>33917_ssc-mir-18a:mirbase
Length = 92
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || |||| |||||||||||||| ||| || |
Sbjct: 14 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaagtgctcctt 73
Query: 66 ctggc 70
|||||
Sbjct: 74 ctggc 78
>25706_xtr-mir-18b:mirbase
Length = 78
Score = 71.9 bits (36), Expect = 5e-14
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||
Sbjct: 4 tgtgttaaggtgcatctagtgcagttagtgacatagtgtagcatctactgccctaaatgc 63
>26404_tgu-mir-18a:mirbase
Length = 72
Score = 69.9 bits (35), Expect = 2e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaa 56
||||||||||||||||||| |||||||| || |||| ||||||||||||||
Sbjct: 11 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaa 61
>26950_eca-mir-18a:mirbase
Length = 61
Score = 69.9 bits (35), Expect = 2e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaa 56
||||||||||||||||||| |||||||| || |||| ||||||||||||||
Sbjct: 1 taaggtgcatctagtgcagatagtgaagtagattagcatctactgccctaa 51
>31780_mmu-mir-18a:mirbase
Length = 96
Score = 65.9 bits (33), Expect = 3e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || ||| |||||||||||||| ||| || |
Sbjct: 17 taaggtgcatctagtgcagatagtgaagtagactagcatctactgccctaagtgctcctt 76
Query: 66 ctggc 70
|||||
Sbjct: 77 ctggc 81
>32664_rno-mir-18a:mirbase
Length = 96
Score = 65.9 bits (33), Expect = 3e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
||||||||||||||||||| |||||||| || ||| |||||||||||||| ||| || |
Sbjct: 17 taaggtgcatctagtgcagatagtgaagtagactagcatctactgccctaagtgctcctt 76
Query: 66 ctggc 70
|||||
Sbjct: 77 ctggc 81
>26405_tgu-mir-18b:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 5e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtga 31
|||||||||||||||||||||||||||||||
Sbjct: 96 tgtgttaaggtgcatctagtgcagttagtga 126
>34211_dre-mir-18a:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 2e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||| ||||||||||||||||||| |||||||| || ||| | |||||||||||| |||
Sbjct: 6 tgtgctaaggtgcatctagtgcagatagtgaagtagactagcacctactgccctaagtgc 65
Query: 61 cccatctggc 70
|| ||||||
Sbjct: 66 tccttctggc 75
>34550_fru-mir-18:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 5e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||| ||||||||||||||||||| ||||||| || ||| | |||||||||||| |||
Sbjct: 2 tgtgctaaggtgcatctagtgcagatagtgaaatagactagcacctactgccctaagtgc 61
Query: 61 cccatctggc 70
|| ||||||
Sbjct: 62 tccttctggc 71
>34698_tni-mir-18:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 5e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgc 60
|||| ||||||||||||||||||| ||||||| || ||| | |||||||||||| |||
Sbjct: 2 tgtgctaaggtgcatctagtgcagatagtgaaatagactagcacctactgccctaagtgc 61
Query: 61 cccatctggc 70
|| ||||||
Sbjct: 62 tccttctggc 71
>34212_dre-mir-18b:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgccctaaatgccccat 65
|||||||||| |||||||| ||||||| || ||| | |||||||||||| |||||| |
Sbjct: 13 taaggtgcatttagtgcagatagtgaaatagactagcacctactgccctaagtgcccctt 72
Query: 66 ctggc 70
|||||
Sbjct: 73 ctggc 77
>34213_dre-mir-18c:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 6 taaggtgcatctagtgcagttagtgaagcagcttagaatctactgc 51
|||||||||||| ||| ||||||||||| || ||| |||||||||
Sbjct: 11 taaggtgcatcttgtgtagttagtgaagtagtctagtatctactgc 56
>25433_pma-mir-18a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgtgttaaggtgcatctagtgcagttagt 29
|||| ||||||||||||||||||| ||||
Sbjct: 13 tgtgctaaggtgcatctagtgcagatagt 41
