miRNEST 2.0, an integrative microRNA resource :: BLAST
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 14
Query: 61 acaggag 67
|||||||
Sbjct: 13 acaggag 7
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 14
Query: 61 acaggag 67
|||||||
Sbjct: 13 acaggag 7
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 69
Query: 61 acaggag 67
|||||||
Sbjct: 70 acaggag 76
>26413_tgu-mir-24:mirbase
Length = 132
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 59 tccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagga 118
Query: 61 acaggag 67
|||||||
Sbjct: 119 acaggag 125
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Minus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 75 tccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagga 16
Query: 61 acaggag 67
|||||||
Sbjct: 15 acaggag 9
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Minus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 75 tccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagga 16
Query: 61 acaggag 67
|||||||
Sbjct: 15 acaggag 9
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>33024_rno-mir-3074:mirbase
Length = 117
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Minus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 88 tccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagga 29
Query: 61 acaggag 67
|||||||
Sbjct: 28 acaggag 22
>25908_gga-mir-24:mirbase
Length = 68
Score = 117 bits (59), Expect = 1e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 2 tccggtgcctactgagctgatatcagttctgattttacatactggctcagttcagcagga 61
Query: 61 acaggag 67
|||||||
Sbjct: 62 acaggag 68
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 4 ggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcaggaaca 63
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ggtgcctactgagctgatatcagttctcattgtacacactggctcagttcagcaggaaca 60
Query: 64 gg 65
||
Sbjct: 61 gg 62
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 97.6 bits (49), Expect = 9e-22
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 4 ggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggtgcctactgagctgataacagttctgattttacacactggctcagttcagcagga 57
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 93.7 bits (47), Expect = 1e-20
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 5 gtgcctactgagctgatatcagttctcattttacacactggctcagttcagcaggaacag 64
||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 6 gtgcctactgaactgatatcagttct-atttcacacactggctcagttcagcaggaacag 64
Query: 65 gag 67
|||
Sbjct: 65 gag 67
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 93.7 bits (47), Expect = 1e-20
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 5 gtgcctactgagctgatatcagttctcattttacacactggctcagttcagcaggaacag 64
||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 6 gtgcctactgaactgatatcagttct-atttcacacactggctcagttcagcaggaacag 64
Query: 65 gag 67
|||
Sbjct: 65 gag 67
>31442_oan-mir-24:mirbase
Length = 84
Score = 85.7 bits (43), Expect = 3e-18
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 5 gtgcctactgagctgatatcagttctcattttacacactggctcagttcagcaggaacag 64
||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 15 gtgcctactgagctgatatcagttctcgttg-acccactggctcagttcagcaggaacag 73
Query: 65 gag 67
|||
Sbjct: 74 gag 76
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 8e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 38 cacactggctcagttcagcaggaacagga 66
|||||||||||||||||||||||||||||
Sbjct: 45 cacactggctcagttcagcaggaacagga 73
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 8e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 38 cacactggctcagttcagcaggaacagga 66
|||||||||||||||||||||||||||||
Sbjct: 45 cacactggctcagttcagcaggaacagga 73
>34230_dre-mir-24-3:mirbase
Length = 142
Score = 58.0 bits (29), Expect = 8e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 39 acactggctcagttcagcaggaacaggag 67
|||||||||||||||||||||||||||||
Sbjct: 76 acactggctcagttcagcaggaacaggag 104
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 cactggctcagttcagcaggaacaggag 67
||||||||||||||||||||||||||||
Sbjct: 58 cactggctcagttcagcaggaacaggag 85
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 40 cactggctcagttcagcaggaacaggag 67
||||||||||||||||||||||||||||
Sbjct: 36 cactggctcagttcagcaggaacaggag 9
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 40 cactggctcagttcagcaggaacaggag 67
||||||||||||||||||||||||||||
Sbjct: 36 cactggctcagttcagcaggaacaggag 9
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 cactggctcagttcagcaggaacaggag 67
||||||||||||||||||||||||||||
Sbjct: 58 cactggctcagttcagcaggaacaggag 85
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 38 cacactggctcagttcagcaggaacagg 65
||||||||||||||||||||||||||||
Sbjct: 45 cacactggctcagttcagcaggaacagg 72
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 cactggctcagttcagcaggaacaggag 67
||||||||||||||||||||||||||||
Sbjct: 46 cactggctcagttcagcaggaacaggag 73
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 40 cactggctcagttcagcaggaacaggag 67
||||||||||||||||||||||||||||
Sbjct: 41 cactggctcagttcagcaggaacaggag 68
>26961_eca-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacaggag 67
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacaggag 67
|||||||||||||||||||||||||||
Sbjct: 44 actggctcagttcagcaggaacaggag 70
>28270_ggo-mir-24:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 39 acactggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 39 acactggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 39 acactggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 39 acactggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 39 acactggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacaggag 67
|||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggag 78
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacaggag 67
|||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggag 78
>25444_pma-mir-24:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 cactggctcagttcagcaggaacag 64
|||||||||||||||||||||||||
Sbjct: 55 cactggctcagttcagcaggaacag 79
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||
Sbjct: 38 actggctcagttcagcaggaacagg 62
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||
Sbjct: 48 actggctcagttcagcaggaacagg 72
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 actggctcagttcagcaggaacagg 65
|||||||||||||||||||||||||
Sbjct: 49 actggctcagttcagcaggaacagg 73
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 ctggctcagttcagcaggaacagg 65
||||||||||||||||||||||||
Sbjct: 55 ctggctcagttcagcaggaacagg 78
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 ctggctcagttcagcaggaacagg 65
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 ctggctcagttcagcaggaacagg 65
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>25660_xla-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 42 ctggctcagttcagcagga 60
|||||||||||||||||||
Sbjct: 44 ctggctcagttcagcagga 62
>25718_xtr-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 42 ctggctcagttcagcagga 60
|||||||||||||||||||
Sbjct: 44 ctggctcagttcagcagga 62
