miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28400_hsa-mir-33b:mirbase
Length = 96
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 61
Query: 61 cggcagtgcagcccggagccggcccctggcaccac 95
|||||||||||||||||||||||||||||||||||
Sbjct: 62 cggcagtgcagcccggagccggcccctggcaccac 96
>27690_mml-mir-33b:mirbase
Length = 96
Score = 184 bits (93), Expect = 8e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 61
Query: 61 cggcagtgcagcccggagccggcccctggcacc 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 cggcagtgcagcccggagccggcccctggcacc 94
>26662_cfa-mir-33b:mirbase
Length = 94
Score = 168 bits (85), Expect = 5e-43
Identities = 91/93 (97%)
Strand = Plus / Plus
Query: 1 cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 60
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 2 cgggcggccccgcggtgcattgctgttgcattgcacgtgagtgacgcgggtgcagtgcct 61
Query: 61 cggcagtgcagcccggagccggcccctggcacc 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 cggcagtgcagcccggagccggcccctggcacc 94
>33174_bta-mir-33b:mirbase
Length = 94
Score = 155 bits (78), Expect = 7e-39
Identities = 90/93 (96%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 cgggcggccccgcggtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcct 60
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 2 cgggcggccccgcggtgcattgctgttgcattgca--tgtgtgaggcaggtgcagtgcct 59
Query: 61 cggcagtgcagcccggagccggcccctggcacc 93
|||||||||||||||||||||||||||||||||
Sbjct: 60 cggcagtgcagcccggagccggcccctggcacc 92
>26983_eca-mir-33b:mirbase
Length = 56
Score = 111 bits (56), Expect = 9e-26
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 15 gtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcctcggcagtgca 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcattgctgttgcattgcacgtgtgtgaggcgggtgcagtgcctcggcagtgca 56
>30790_ppy-mir-33b:mirbase
Length = 90
Score = 89.7 bits (45), Expect = 3e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 49 ggtgcagtgcctcggcagtgcagcccggagccggcccctggcacc 93
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ggtgcagtgcctcggcagtgcagcccggagccggcccctggcacc 90
