miRNEST 2.0, an integrative microRNA resource :: BLAST
>28211_mne-mir-130a:mirbase
Length = 89
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggccgtgtagtg 88
||||||||||||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggccgtgtagtg 89
>28303_ggo-mir-130a:mirbase
Length = 89
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggccgtgtagtg 88
||||||||||||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggccgtgtagtg 89
>28442_hsa-mir-130a:mirbase
Length = 89
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggccgtgtagtg 88
||||||||||||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggccgtgtagtg 89
>30090_ppa-mir-130a:mirbase
Length = 89
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggccgtgtagtg 88
||||||||||||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggccgtgtagtg 89
>30827_ppy-mir-130a:mirbase
Length = 89
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggccgtgtagtg 88
||||||||||||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggccgtgtagtg 89
>27728_mml-mir-130a:mirbase
Length = 81
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggcc 80
||||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggcc 81
>33211_bta-mir-130a:mirbase
Length = 89
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 gctgcgggccggagctcttttcacattgtgctactgtctgcgcctgtcactagcagtgca 61
Query: 61 atgttaaaagggcattggc 79
|||||||||||||||||||
Sbjct: 62 atgttaaaagggcattggc 80
>27380_mdo-mir-130a:mirbase
Length = 76
Score = 131 bits (66), Expect = 9e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 6 tggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtt 65
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tggccagagctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgta 60
Query: 66 aaaagggcattggc 79
||||||||||||||
Sbjct: 61 aaaagggcattggc 74
>33979_ssc-mir-130a:mirbase
Length = 79
Score = 131 bits (66), Expect = 9e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 7 ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtta 66
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3 ggccggagctcttttcacattgtgctactgtctgcacctatcactagcagtgcaatgtta 62
Query: 67 aaagggcattggcc 80
||||||||||||||
Sbjct: 63 aaagggcattggcc 76
>27022_eca-mir-130a:mirbase
Length = 64
Score = 111 bits (56), Expect = 8e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 12 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 71
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gagctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagg 60
Query: 72 gcat 75
||||
Sbjct: 61 gcat 64
>32731_rno-mir-130a:mirbase
Length = 88
Score = 109 bits (55), Expect = 3e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 1 gctgctggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgca 60
|||||||||| |||||||||||||||||||||||||||| ||| ||| | |||||||||
Sbjct: 2 gctgctggccggagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgca 61
Query: 61 atgttaaaagggcattggccgtgtagt 87
||||||||||||||| |||| ||||||
Sbjct: 62 atgttaaaagggcatcggccttgtagt 88
>26698_cfa-mir-130a:mirbase
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 14 gctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagggc 73
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gctcttttcacattgtgctactgtctgcacctaccactagcagtgcaatgttaaaagggc 60
Query: 74 at 75
||
Sbjct: 61 at 62
>31485_oan-mir-130a:mirbase
Length = 122
Score = 91.7 bits (46), Expect = 8e-20
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 7 ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgt 64
|||| |||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 24 ggccggagctcttttcacattgtgctactgtctgcgcccgtcactagcagtgcaatgt 81
>33089_rno-mir-3590:mirbase
Length = 74
Score = 91.7 bits (46), Expect = 8e-20
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtta 66
|||| |||||||||||||||||||||||||||| ||| ||| | |||||||||||||||
Sbjct: 74 ggccggagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgtta 15
Query: 67 aaagggcattggcc 80
||||||||| ||||
Sbjct: 14 aaagggcatcggcc 1
>33090_rno-mir-3590:mirbase
Length = 74
Score = 91.7 bits (46), Expect = 8e-20
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 7 ggccagagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgtta 66
|||| |||||||||||||||||||||||||||| ||| ||| | |||||||||||||||
Sbjct: 74 ggccggagctcttttcacattgtgctactgtctacacgtgtaccgagcagtgcaatgtta 15
Query: 67 aaagggcattggcc 80
||||||||| ||||
Sbjct: 14 aaagggcatcggcc 1
>31856_mmu-mir-130a:mirbase
Length = 64
Score = 71.9 bits (36), Expect = 7e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 12 gagctcttttcacattgtgctactgtctgcacctgtcactagcagtgcaatgttaaaagg 71
|||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||
Sbjct: 1 gagctcttttcacattgtgctactgtct-aacgtgtaccgagcagtgcaatgttaaaagg 59
Query: 72 gcat 75
||||
Sbjct: 60 gcat 63
>25772_xtr-mir-130a:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggcc 80
|||||||||||||||||||||||||||||
Sbjct: 51 agcagtgcaatgttaaaagggcattggcc 79
>25949_gga-mir-130c:mirbase
Length = 94
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggcc 80
|||||||||||||||||||||||||||||
Sbjct: 58 agcagtgcaatgttaaaagggcattggcc 86
>26461_tgu-mir-130c:mirbase
Length = 112
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggcc 80
|||||||||||||||||||||||||||||
Sbjct: 79 agcagtgcaatgttaaaagggcattggcc 107
>31486_oan-mir-130b:mirbase
Length = 129
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggcc 80
|||||||||||||||||||||||||||||
Sbjct: 79 agcagtgcaatgttaaaagggcattggcc 107
>34289_dre-mir-130a-1:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggcc 80
|||||||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcattggcc 80
>34290_dre-mir-130a-2:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggcc 80
|||||||||||||||||||||||||||||
Sbjct: 52 agcagtgcaatgttaaaagggcattggcc 80
>25774_xtr-mir-130c:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tagcagtgcaatgttaaaagggcattggc 79
|||||||||||| ||||||||||||||||
Sbjct: 42 tagcagtgcaatattaaaagggcattggc 70
>25947_gga-mir-130a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggc 79
||||||||||| ||||||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcattggc 77
>26459_tgu-mir-130a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggc 79
||||||||||| ||||||||||||||||
Sbjct: 39 agcagtgcaatattaaaagggcattggc 66
>34292_dre-mir-130c-1:mirbase
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggc 79
||||||||||| ||||||||||||||||
Sbjct: 78 agcagtgcaatattaaaagggcattggc 105
>34293_dre-mir-130c-2:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggc 79
||||||||||| ||||||||||||||||
Sbjct: 48 agcagtgcaatattaaaagggcattggc 75
>34595_fru-mir-130:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggc 79
||||||||||| ||||||||||||||||
Sbjct: 50 agcagtgcaatattaaaagggcattggc 77
>34742_tni-mir-130:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcattggc 79
||||||||||| ||||||||||||||||
Sbjct: 47 agcagtgcaatattaaaagggcattggc 74
>25480_pma-mir-130b:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 agtgcaatgttaaaagggcattgg 78
|||||||||| |||||||||||||
Sbjct: 52 agtgcaatgtgaaaagggcattgg 75
>31487_oan-mir-130c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 agcagtgcaatgttaaaagggcat 75
|||||||||||| |||||||||||
Sbjct: 51 agcagtgcaatggtaaaagggcat 74
