miRNEST 2.0, an integrative microRNA resource :: BLAST
>27756_mml-mir-148a:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>28471_hsa-mir-148a:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>30855_ppy-mir-148a:mirbase
Length = 68
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>27050_eca-mir-148a:mirbase
Length = 68
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>31882_mmu-mir-148a:mirbase
Length = 99
Score = 125 bits (63), Expect = 4e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 5 caaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaactttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 caaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaactttg 81
Query: 65 tct 67
|||
Sbjct: 82 tct 84
>33235_bta-mir-148a:mirbase
Length = 68
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>33998_ssc-mir-148a:mirbase
Length = 68
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>26723_cfa-mir-148a:mirbase
Length = 60
Score = 111 bits (56), Expect = 6e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 6 aaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaactttgt 65
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 aaagttctgagacactccgactctgaatatgatagaagtcagtgcactacagaactttgt 60
>31506_oan-mir-148:mirbase
Length = 84
Score = 109 bits (55), Expect = 2e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
|||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 9 gaggcaaagttctgtgacactcagactctgattatgatagaagtcagtgcactacagaac 68
Query: 61 tttgtct 67
|||||||
Sbjct: 69 tttgtct 75
>27397_mdo-mir-148:mirbase
Length = 68
Score = 101 bits (51), Expect = 6e-23
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gaggcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaac 60
|||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 1 gaggcaaagttctgggacactcagactctgattaggatagaagtcagtgcactacagaac 60
Query: 61 tttgtct 67
|||||||
Sbjct: 61 tttgtct 67
>26479_tgu-mir-148:mirbase
Length = 112
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 4 gcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaacttt 63
||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 41 gcaaagttctgtgacactccgactctgggtacgatagcagtcagtgcactacagaacttt 100
Query: 64 gtct 67
||||
Sbjct: 101 gtct 104
>26558_tgu-mir-2957:mirbase
Length = 74
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 4 gcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaacttt 63
||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 68 gcaaagttctgtgacactccgactctgggtacgatagcagtcagtgcactacagaacttt 9
Query: 64 gtct 67
||||
Sbjct: 8 gtct 5
>25797_xtr-mir-148a:mirbase
Length = 86
Score = 81.8 bits (41), Expect = 5e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 5 caaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaactttg 64
|||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 14 caaagttctgtgacacttagactctgaatatgatagcagtcagtgcactacagaactttg 73
Query: 65 t 65
|
Sbjct: 74 t 74
>25971_gga-mir-148a:mirbase
Length = 68
Score = 79.8 bits (40), Expect = 2e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 4 gcaaagttctgagacactccgactctgagtatgatagaagtcagtgcactacagaacttt 63
||||||||||| ||||||| ||||||| || ||||| ||||||||||||||||||||||
Sbjct: 4 gcaaagttctgtgacactcagactctggttacgatagcagtcagtgcactacagaacttt 63
Query: 64 gtct 67
||||
Sbjct: 64 gtct 67
>34321_dre-mir-148:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 17 acactccgactctgagtatgatagaagtcagtgcactacagaactttgt 65
||||||||||||||| ||| | | |||||||||| |||||||||||||
Sbjct: 24 acactccgactctga--atgtttgcagtcagtgcattacagaactttgt 70
>25798_xtr-mir-148b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 gaagtcagtgcactacagaactttgtct 67
|||||||||||| ||||||||||||||
Sbjct: 56 gaagtcagtgcatcacagaactttgtct 83
>34606_fru-mir-148:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 agtcagtgcactacagaactttgt 65
|||||||||| |||||||||||||
Sbjct: 47 agtcagtgcattacagaactttgt 70
>34753_tni-mir-148:mirbase
Length = 66
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 agtcagtgcactacagaactttgt 65
|||||||||| |||||||||||||
Sbjct: 41 agtcagtgcattacagaactttgt 64
>27051_eca-mir-148b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 49 aagtcagtgcatcacagaactttgtct 75
>27052_eca-mir-148b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 49 aagtcagtgcatcacagaactttgtct 75
>27757_mml-mir-148b:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtct 86
>28472_hsa-mir-148b:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtct 86
>30243_ptr-mir-148b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtct 86
>30856_ppy-mir-148b:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 60 aagtcagtgcatcacagaactttgtct 86
>31883_mmu-mir-148b:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 58 aagtcagtgcatcacagaactttgtct 84
>32755_rno-mir-148b:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 58 aagtcagtgcatcacagaactttgtct 84
>32756_rno-mir-148b:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 58 aagtcagtgcatcacagaactttgtct 84
>33236_bta-mir-148b:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 51 aagtcagtgcatcacagaactttgtct 77
>33999_ssc-mir-148b:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 41 aagtcagtgcactacagaactttgtct 67
||||||||||| ||||||||||||||
Sbjct: 46 aagtcagtgcatcacagaactttgtct 72