miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28473_hsa-mir-149:mirbase
Length = 89
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 61
Query: 61 ggacgggggctgtgctggggc 81
|||||||||||||||||||||
Sbjct: 62 ggacgggggctgtgctggggc 82
>27758_mml-mir-149:mirbase
Length = 89
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 ccggcgcccaagctctggctccgtgtcttcactcccgtgtttgtccgaggagggagggag 61
Query: 61 ggacgggggctgtgctggggc 81
|||||||||||||||||||||
Sbjct: 62 ggacgggggctgtgctggggc 82
>30857_ppy-mir-149:mirbase
Length = 85
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 2 ccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggagggag 61
Query: 61 ggacgggggctgtgctggggc 81
|||||||||||||||||||||
Sbjct: 62 ggacgggggctgtgctggggc 82
>26725_cfa-mir-149:mirbase
Length = 83
Score = 131 bits (66), Expect = 8e-32
Identities = 78/81 (96%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 ccggcgcccgggctctggctccgtgtcttcactcccgtg--tgtccgaggagggagggag 59
Query: 61 ggacgggggctgtgctggggc 81
|||||||||||||||||||||
Sbjct: 60 ggacgggggctgtgctggggc 80
>27053_eca-mir-149:mirbase
Length = 89
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 ccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggag 61
Query: 61 ggacgggggctgtgctggggc 81
|||||||||||||||||||||
Sbjct: 62 ggacgggggctgtgctggggc 82
>34000_ssc-mir-149:mirbase
Length = 76
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 12 gctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggagggacgggggct 71
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 7 gctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggagggacgggggct 66
Query: 72 gtgctggggc 81
||||||||||
Sbjct: 67 gtgctggggc 76
>31884_mmu-mir-149:mirbase
Length = 66
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 12 gctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggagggacgggggct 71
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 gctctggctccgtgtcttcactcccgtgtttgtccgaggagggagggagggacgggggcg 61
Query: 72 gtgct 76
|||||
Sbjct: 62 gtgct 66
