miRNEST 2.0, an integrative microRNA resource :: BLAST
>27772_mml-mir-181d:mirbase
Length = 137
Score = 254 bits (128), Expect = 1e-68
Identities = 134/136 (98%)
Strand = Plus / Plus
Query: 1 tcccctcccctaggccacagccgaggtcacaatcaacattcattgttgtcggtgggttgt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcccctcccctaggccacagccaaggtcacaatcaacattcattgttgtcggtgggttgt 61
Query: 61 gaggaccgaggccagacccaccgggggatgaatgtcactgtggctgggccagacatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 gaggaccgaggccagacccaccgggggatgaatgtcactgtggctgggccagacacggct 121
Query: 121 taaggggaatggggac 136
||||||||||||||||
Sbjct: 122 taaggggaatggggac 137
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 254 bits (128), Expect = 1e-68
Identities = 134/136 (98%)
Strand = Plus / Plus
Query: 1 tcccctcccctaggccacagccgaggtcacaatcaacattcattgttgtcggtgggttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcccctcccctaggccacagccgaggtcacaatcaacattcattgttgtcggtgggttgt 61
Query: 61 gaggaccgaggccagacccaccgggggatgaatgtcactgtggctgggccagacatggct 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 gaggactgaggccagacccaccgggggatgaatgtcactgtggctgggccagacacggct 121
Query: 121 taaggggaatggggac 136
||||||||||||||||
Sbjct: 122 taaggggaatggggac 137
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 254 bits (128), Expect = 1e-68
Identities = 134/136 (98%)
Strand = Plus / Plus
Query: 1 tcccctcccctaggccacagccgaggtcacaatcaacattcattgttgtcggtgggttgt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcccctcccctaggccacagccaaggtcacaatcaacattcattgttgtcggtgggttgt 60
Query: 61 gaggaccgaggccagacccaccgggggatgaatgtcactgtggctgggccagacatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 gaggaccgaggccagacccaccgggggatgaatgtcactgtggctgggccagacacggct 120
Query: 121 taaggggaatggggac 136
||||||||||||||||
Sbjct: 121 taaggggaatggggac 136
>33249_bta-mir-181d:mirbase
Length = 113
Score = 153 bits (77), Expect = 4e-38
Identities = 106/115 (92%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 1 tcccctcccctaggccacagccgaggtcacaatcaacattcattgttgtcggtgggttgt 60
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcccctcccttaggccacagcgaaggtcacaatcaacattcattgttgtcggtgggttgt 60
Query: 61 gaggaccgaggccagacccaccgggggatgaatgtcactgtggctgggccagaca 115
||| ||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ---gacagagaccagacccaccgagggatgaatgtcactgtggctgggccagaca 112
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 129 bits (65), Expect = 6e-31
Identities = 78/81 (96%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 27 tcacaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgggg 86
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttgtga-gacggaggccagacccaccgagg 59
Query: 87 gatgaatgtcactgtggctgg 107
|||||||||||||||||||||
Sbjct: 60 gatgaatgtcactgtggctgg 80
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 129 bits (65), Expect = 6e-31
Identities = 78/81 (96%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 27 tcacaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgggg 86
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttgtga-gacggaggccagacccaccgagg 59
Query: 87 gatgaatgtcactgtggctgg 107
|||||||||||||||||||||
Sbjct: 60 gatgaatgtcactgtggctgg 80
>32767_rno-mir-181d:mirbase
Length = 83
Score = 119 bits (60), Expect = 6e-28
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 25 ggtcacaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgg 84
||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggttgtgagga-gaagaccagacccaccgg 59
Query: 85 gggatgaatgtcactgtggctggg 108
||||||||||||||||||||||||
Sbjct: 60 gggatgaatgtcactgtggctggg 83
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 111 bits (56), Expect = 1e-25
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 35 aacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgggggatgaatg 94
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
Query: 95 tcac 98
||||
Sbjct: 61 tcac 64
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 97.6 bits (49), Expect = 2e-21
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 29 acaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccggggga 88
||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggttgtgagga-ggcagccagacccaccggggga 59
Query: 89 tgaatgtcactgt 101
|||||||||||||
Sbjct: 60 tgaatgtcactgt 72
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 2 aggtcacaatcaacattcattgctgtcggtgggttg 37
>27579_lla-mir-181b:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>28223_mne-mir-181b:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 1 aggtcacaatcaacattcattgctgtcggtgggttg 36
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgctgtcggtgggttg 60
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
|||||||||||||||||||||| ||||||||||||
Sbjct: 4 aggtcacaatcaacattcattgctgtcggtgggtt 38
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
|||||||||||||||||||||| ||||||||||||
Sbjct: 2 aggtcacaatcaacattcattgctgtcggtgggtt 36
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 25 ggtcacaatcaacattcattgttgtcggtgggttg 59
||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttg 35
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
|||||||||||||||||||||| ||||||||||||
Sbjct: 3 aggtcacaatcaacattcattgctgtcggtgggtt 37
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
|||||||||||||||||||||| ||||||||||||
Sbjct: 3 aggtcacaatcaacattcattgctgtcggtgggtt 37
>31512_oan-mir-181c:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 26 gtcacaatcaacattcattgttgtcggtgggttgtga 62
||||||||||||||||||| ||||||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggttgtga 46
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
|||||| ||||||||||||||| ||||||||||||
Sbjct: 26 aggtcataatcaacattcattgctgtcggtgggtt 60
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 25 ggtcacaatcaacattcattgttgtcggtgggtt 58
||||||||| ||||||||||| ||||||||||||
Sbjct: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 caatcaacattcattgttgtcggtgggtt 58
|||||||||||||||| ||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggtt 39
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 caatcaacattcattgttgtcggtgggtt 58
|||||||||||||||| ||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggtt 34
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 30 caatcaacattcattgttgtcggtgggttgt 60
|||| ||||||||||| ||||||||||||||
Sbjct: 9 caataaacattcattgctgtcggtgggttgt 39
>31511_oan-mir-181b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
||||| |||| ||||||||||| ||||||||||||
Sbjct: 16 aggtcccaatgaacattcattgctgtcggtgggtt 50
>27062_eca-mir-181b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tcaacattcattgttgtcggtgggtt 58
||||||||||||| ||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggtt 36
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 35 aacattcattgttgtcggtgggttg 59
||||||||||| |||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttg 25
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 caatcaacattcattgttgtcggtgggtt 58
|||| ||||||||||| ||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggtt 39
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 caatcaacattcattgttgtcggtgggtt 58
|||| ||||||||||| ||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 30 caatcaacattcattgttgtcggtgggtt 58
|||| ||||||||||| ||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 35 aacattcattgttgtcggtgggtt 58
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
