miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28506_hsa-mir-195:mirbase
Length = 87
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>30111_ppa-mir-195:mirbase
Length = 87
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>30886_ppy-mir-195:mirbase
Length = 87
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>27789_mml-mir-195:mirbase
Length = 87
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcaagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>28322_ggo-mir-195:mirbase
Length = 87
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcttcctgggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>27079_eca-mir-195:mirbase
Length = 94
Score = 147 bits (74), Expect = 1e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
|||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 7 agctcccctggctctagcagcacagaaatattggcactgggaagagagtctgccaatatt 66
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 67 ggctgtgctgctccaggcagggtggt 92
>31914_mmu-mir-195:mirbase
Length = 94
Score = 135 bits (68), Expect = 6e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 7 cctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgt 66
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 13 cctggctctagcagcacagaaatattggcatggggaagtgagtctgccaatattggctgt 72
Query: 67 gctgctccaggcagggtggt 86
||||||||||||||||||||
Sbjct: 73 gctgctccaggcagggtggt 92
>32782_rno-mir-195:mirbase
Length = 87
Score = 135 bits (68), Expect = 6e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 7 cctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgt 66
||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 7 cctggctctagcagcacagaaatattggcacgggtaagtgagtctgccaatattggctgt 66
Query: 67 gctgctccaggcagggtggt 86
||||||||||||||||||||
Sbjct: 67 gctgctccaggcagggtggt 86
>33267_bta-mir-195:mirbase
Length = 87
Score = 131 bits (66), Expect = 9e-32
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 1 agcttccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatatt 60
|||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||
Sbjct: 1 agctcccctggctctagcagcacagaaatattggcactgggaagaaagcctgccaatatt 60
Query: 61 ggctgtgctgctccaggcagggtggt 86
||||||||||||||||||||||||||
Sbjct: 61 ggctgtgctgctccaggcagggtggt 86
>26751_cfa-mir-195:mirbase
Length = 61
Score = 101 bits (51), Expect = 8e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 15 tagcagcacagaaatattggcacagggaagcgagtctgccaatattggctgtgctgctc 73
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacagaaatattggcactgggaagagagtctgccaatattggctgtgctgctc 59
>34025_ssc-mir-195:mirbase
Length = 80
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 6 ccctggctctagcagcacagaaatattggcacagggaagcgagtctgccaatattggctg 65
|||||||||||||||||||||||||||||||| ||| | |||||||||| |||||||||
Sbjct: 7 ccctggctctagcagcacagaaatattggcaccgggcggagagtctgccagtattggctg 66
Query: 66 tgctgctccaggca 79
|||||| |||||||
Sbjct: 67 tgctgccccaggca 80
>27415_mdo-mir-195:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 6 ccctggctctagcagcacagaaatattggcac 37
|||||||| |||||||||| ||||||||||||
Sbjct: 1 ccctggctttagcagcacaaaaatattggcac 32
