miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28333_ggo-mir-217:mirbase
Length = 110
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
Query: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
>28535_hsa-mir-217:mirbase
Length = 110
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
Query: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
>30120_ppa-mir-217:mirbase
Length = 110
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
Query: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
>30911_ppy-mir-217:mirbase
Length = 110
Score = 208 bits (105), Expect = 6e-55
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataa 60
Query: 61 gaatcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatcagccaccatcagttcctaatgcattgccttcagcatctaaacaa 109
>27813_mml-mir-217:mirbase
Length = 110
Score = 204 bits (103), Expect = 1e-53
Identities = 106/107 (99%)
Strand = Plus / Plus
Query: 3 tataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataaga 62
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 tataattattacatagtttttgatgtcgcagattctgcatcaggaactgattggataaga 62
Query: 63 atcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
>34042_ssc-mir-217:mirbase
Length = 107
Score = 178 bits (90), Expect = 5e-46
Identities = 102/106 (96%)
Strand = Plus / Plus
Query: 4 ataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataagaa 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataattattacagagtttttgatgtcgcagatactgcatcaggaactgattggataagaa 60
Query: 64 tcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 ttggtcaccatcagttcttaatgcattgccttcagcatctaaacaa 106
>31537_oan-mir-217:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 17 agtttttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatca 76
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 9 agtttttgatgtcgcagatactgcatcaggaactgattggataataatcagtcaccatca 68
Query: 77 gttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||
Sbjct: 69 gttcctaatgcattgccttcagcatctaaacaa 101
>33294_bta-mir-217:mirbase
Length = 110
Score = 172 bits (87), Expect = 3e-44
Identities = 102/107 (95%)
Strand = Plus / Plus
Query: 3 tataattattacatagtttttgatgtcgcagatactgcatcaggaactgattggataaga 62
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tataattaacacagagtttttgatgtcgcagatactgcatcaggaactgattggataaga 62
Query: 63 atcagtcaccatcagttcctaatgcattgccttcagcatctaaacaa 109
||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 63 atcggtcaccatcagttcctcatgcattgccttcagcatctaaacaa 109
>26006_gga-mir-217:mirbase
Length = 107
Score = 168 bits (85), Expect = 5e-43
Identities = 91/93 (97%)
Strand = Plus / Plus
Query: 17 agtttttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatca 76
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 14 agttcttgatgtcgcagatactgcatcaggaactgattggataataatcagtcaccatca 73
Query: 77 gttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||
Sbjct: 74 gttcctaatgcattgccttcagcatctaaacaa 106
>32809_rno-mir-217:mirbase
Length = 105
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 20 ttttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatcagtt 79
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 17 ttttgatgtcgcagatactgcatcaggaactgactggataagactcagtcaccatcagtt 76
Query: 80 cctaatgcattgccttcagcatctaaaca 108
|||||||||||||||||||||||||||||
Sbjct: 77 cctaatgcattgccttcagcatctaaaca 105
>26777_cfa-mir-217:mirbase
Length = 82
Score = 147 bits (74), Expect = 2e-36
Identities = 80/82 (97%)
Strand = Plus / Plus
Query: 22 ttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatcagttcc 81
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ttgatgtcgcagatactgcatcaggaactgattggataagaatgggtcaccatcagttcc 60
Query: 82 taatgcattgccttcagcatct 103
||||||||||||||||||||||
Sbjct: 61 taatgcattgccttcagcatct 82
>31945_mmu-mir-217:mirbase
Length = 108
Score = 137 bits (69), Expect = 2e-33
Identities = 87/93 (93%)
Strand = Plus / Plus
Query: 17 agtttttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatca 76
|||||||||||| ||||||||||||||||||||||| ||||||||| | | || ||||||
Sbjct: 16 agtttttgatgttgcagatactgcatcaggaactgactggataagacttaatccccatca 75
Query: 77 gttcctaatgcattgccttcagcatctaaacaa 109
|||||||||||||||||||||||||||||||||
Sbjct: 76 gttcctaatgcattgccttcagcatctaaacaa 108
>27431_mdo-mir-217:mirbase
Length = 82
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 22 ttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatcagttcc 81
||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1 ttgatgtcgtagatactgcatcaggaactgattggataatattcaggcaccatcagttcc 60
Query: 82 taatgcattgccttcagcatct 103
||||||||||||||||||||||
Sbjct: 61 taatgcattgccttcagcatct 82
>26513_tgu-mir-217:mirbase
Length = 73
Score = 129 bits (65), Expect = 5e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 25 atgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatcagttcctaa 84
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1 atgtcgcagatactgcatcaggaactgattggataataatcactcaccatcagttcctaa 60
Query: 85 tgcattgccttca 97
|||||||||||||
Sbjct: 61 tgcattgccttca 73
>27101_eca-mir-217:mirbase
Length = 57
Score = 113 bits (57), Expect = 3e-26
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 35 tactgcatcaggaactgattggataagaatcagtcaccatcagttcctaatgcattg 91
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactgcatcaggaactgattggataagaatcagtcaccatcagttcctaatgcattg 57
>25836_xtr-mir-217:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 22 ttgatgtcgcagatactgcatcaggaactgattggataagaatcagtcaccatcagttcc 81
||||||| | ||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 1 ttgatgttgtagatactgcatcaggaactgattggatcccagggagcagccatcagttcc 60
Query: 82 taatgcattgccttcagcatcta 104
||||||| ||||||| |||||||
Sbjct: 61 taatgcactgccttcggcatcta 83
>34373_dre-mir-217-1:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 33 gatactgcatcaggaactgattggataagaatcagtcaccatcagttcctaatgcattgc 92
|||||||||||||||||||||||||| | | |||| |||||||||||| ||||| | |
Sbjct: 23 gatactgcatcaggaactgattggatgatattcaggagccatcagttcctgatgcactcc 82
Query: 93 cttcagcatc 102
| ||||||||
Sbjct: 83 catcagcatc 92
>34374_dre-mir-217-2:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 33 gatactgcatcaggaactgattggataagaatcagtcaccatcagttcctaatgcattgc 92
|||||||||||||||||||||||||| | | |||| |||||||||||| ||||| | |
Sbjct: 23 gatactgcatcaggaactgattggatgatattcaggagccatcagttcctgatgcactcc 82
Query: 93 cttcagcatc 102
| ||||||||
Sbjct: 83 catcagcatc 92
>25530_pma-mir-217a:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 33 gatactgcatcaggaactgattggata 59
|||||||||||||||||||||||||||
Sbjct: 8 gatactgcatcaggaactgattggata 34
>34787_tni-mir-217:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 33 gatactgcatcaggaactgattggataagaatcagtcaccatcagttcctaatgcattgc 92
|||||||||||||||||||||||| | | | ||| ||| |||| ||| |||||||||
Sbjct: 14 gatactgcatcaggaactgattggctgatgcttagtacccaacagtacctgatgcattgc 73
Query: 93 cttcagcat 101
|||||||||
Sbjct: 74 cttcagcat 82
>24697_bfl-mir-217:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tactgcatcaggaactgattggat 58
||||||||||||||||||||||||
Sbjct: 8 tactgcatcaggaactgattggat 31
>34639_fru-mir-217:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 gatactgcatcaggaactgattgg 56
||||||||||||||||||||||||
Sbjct: 25 gatactgcatcaggaactgattgg 48
>25335_csa-mir-217:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 agatactgcatcaggaactgattgg 56
||||||||||| |||||||||||||
Sbjct: 13 agatactgcattaggaactgattgg 37
