miRNEST 2.0, an integrative microRNA resource :: BLAST
>27112_eca-mir-301a:mirbase
Length = 86
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
Query: 61 gtattgtcaaagcatctgaaagcag 85
|||||||||||||||||||||||||
Sbjct: 61 gtattgtcaaagcatctgaaagcag 85
>27437_mdo-mir-301:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
Query: 61 gtattgtcaaagcatctgaaagcag 85
|||||||||||||||||||||||||
Sbjct: 61 gtattgtcaaagcatctgaaagcag 85
>27829_mml-mir-301a:mirbase
Length = 86
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
Query: 61 gtattgtcaaagcatctgaaagcag 85
|||||||||||||||||||||||||
Sbjct: 61 gtattgtcaaagcatctgaaagcag 85
>28553_hsa-mir-301a:mirbase
Length = 86
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
Query: 61 gtattgtcaaagcatctgaaagcag 85
|||||||||||||||||||||||||
Sbjct: 61 gtattgtcaaagcatctgaaagcag 85
>33308_bta-mir-301a:mirbase
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
Query: 61 gtattgtcaaagcatctgaaagcag 85
|||||||||||||||||||||||||
Sbjct: 61 gtattgtcaaagcatctgaaagcag 85
>26788_cfa-mir-301a:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 2 ctgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatag 60
Query: 62 tattgtcaaagcatctgaaagcag 85
||||||||||||||||||||||||
Sbjct: 61 tattgtcaaagcatctgaaagcag 84
>26015_gga-mir-301b:mirbase
Length = 90
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 2 ctgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatag 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 ctgctaacgaatgctctgactttattgcactactgtacttcacagctagcagtgcaatag 64
Query: 62 tattgtcaaagcatctgaaagcag 85
||||||||||||||||||||||||
Sbjct: 65 tattgtcaaagcatctgaaagcag 88
>26016_gga-mir-301b:mirbase
Length = 90
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 2 ctgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatag 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 ctgctaacgaatgctctgactttattgcactactgtacttcacagctagcagtgcaatag 64
Query: 62 tattgtcaaagcatctgaaagcag 85
||||||||||||||||||||||||
Sbjct: 65 tattgtcaaagcatctgaaagcag 88
>31545_oan-mir-301:mirbase
Length = 121
Score = 159 bits (80), Expect = 4e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 2 ctgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatag 61
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24 ctgctaacgaatgctctgactttattgcactactgttctttacagctagcagtgcaatag 83
Query: 62 tattgtcaaagcatctgaaagcag 85
||||||||||||||||||||||||
Sbjct: 84 tattgtcaaagcatctgaaagcag 107
>34051_ssc-mir-301:mirbase
Length = 82
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 4 gctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatagta 63
|||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 1 gctaacaaatgctctgactttattgcactactgtactttacagctaccagtccaatagta 60
Query: 64 ttgtcaaagcatctgaaagcag 85
|||||||||||||||| |||||
Sbjct: 61 ttgtcaaagcatctgagagcag 82
>25843_xtr-mir-301-1:mirbase
Length = 84
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 13 tgctctgactttattgcactactgtactttacagctagcagtgcaatagtattgtcaaag 72
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 12 tgctctgactttattgcactactgtactatacagctagcagtgcaatagtattgtcaaag 71
Query: 73 catctgaaagcag 85
|||||| ||||||
Sbjct: 72 catctgcaagcag 84
>32837_rno-mir-301a:mirbase
Length = 100
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 actgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaata 60
|||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11 actgctgacgactgctctgactttattgcactactgtactgtacagctagcagtgcaata 70
Query: 61 gtattgtcaaagcatc 76
||||||||||||||||
Sbjct: 71 gtattgtcaaagcatc 86
>31980_mmu-mir-301a:mirbase
Length = 86
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 2 ctgctaacgaatgctctgactttattgcactactgtactttacagctagcagtgcaatag 61
||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 ctgctaacggctgctctgactttattgcactactgtactttacagcgagcagtgcaatag 61
Query: 62 tattgtcaaagcatc 76
|||||||||||||||
Sbjct: 62 tattgtcaaagcatc 76
>26521_tgu-mir-301:mirbase
Length = 73
Score = 109 bits (55), Expect = 3e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 13 tgctctgactttattgcactactgtactttacagctagcagtgcaatagtattgtcaaag 72
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 3 tgctctgactttattgcactactgtactatacagagagcagtgcaatagtattgtcaaag 62
Query: 73 catctga 79
|||||||
Sbjct: 63 catctga 69
>26522_tgu-mir-301:mirbase
Length = 73
Score = 109 bits (55), Expect = 3e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 13 tgctctgactttattgcactactgtactttacagctagcagtgcaatagtattgtcaaag 72
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 3 tgctctgactttattgcactactgtactatacagagagcagtgcaatagtattgtcaaag 62
Query: 73 catctga 79
|||||||
Sbjct: 63 catctga 69
>34385_dre-mir-301a-1:mirbase
Length = 86
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 13 tgctctgactttattgcactactgtactttacagctagcagtgcaatagtattgtcaaag 72
||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 13 tgctctgacttcattgcactactgtattggacagctagcagtgcaatagtattgtcaaag 72
Query: 73 catctgaaagcag 85
| ||||| |||||
Sbjct: 73 cgtctgagagcag 85
>34386_dre-mir-301a-2:mirbase
Length = 86
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 13 tgctctgactttattgcactactgtactttacagctagcagtgcaatagtattgtcaaag 72
||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 13 tgctctgacttcattgcactactgtattggacagctagcagtgcaatagtattgtcaaag 72
Query: 73 catctgaaagcag 85
| ||||| |||||
Sbjct: 73 cgtctgagagcag 85
>25538_pma-mir-301b:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 cagctagcagtgcaatagtattgtcaaagcatctga 79
|||| ||||||||||||| |||||||||||||||||
Sbjct: 46 cagcaagcagtgcaatagcattgtcaaagcatctga 81
>25844_xtr-mir-301-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcat 75
|||||||||||||||||||||||||||
Sbjct: 42 agcagtgcaatagtattgtcaaagcat 68
>31981_mmu-mir-301b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| ||||||||||||||||||
Sbjct: 53 agcagtgcaatggtattgtcaaagcatctg 82
>32838_rno-mir-301b:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| ||||||||||||||||||
Sbjct: 43 agcagtgcaatggtattgtcaaagcatctg 72
>34388_dre-mir-301c:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 ctagcagtgcaatagtattgtcaaagcat 75
||||||||||||||||||||||| |||||
Sbjct: 46 ctagcagtgcaatagtattgtcatagcat 74
>34648_fru-mir-301:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 ctagcagtgcaatagtattgtcaaagcat 75
||||||||||||||||||||||| |||||
Sbjct: 40 ctagcagtgcaatagtattgtcatagcat 68
>34796_tni-mir-301:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 ctagcagtgcaatagtattgtcaaagcat 75
||||||||||||||||||||||| |||||
Sbjct: 44 ctagcagtgcaatagtattgtcatagcat 72
>26014_gga-mir-301:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcat 75
|||||||||||| ||||||||||||||
Sbjct: 55 agcagtgcaataatattgtcaaagcat 81
>27113_eca-mir-301b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| |||||||||||||||||
Sbjct: 53 agcagtgcaatgatattgtcaaagcatctg 82
>27114_eca-mir-301b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| |||||||||||||||||
Sbjct: 53 agcagtgcaatgatattgtcaaagcatctg 82
>27830_mml-mir-301b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| |||||||||||||||||
Sbjct: 42 agcagtgcaatgatattgtcaaagcatctg 71
>28554_hsa-mir-301b:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| |||||||||||||||||
Sbjct: 43 agcagtgcaatgatattgtcaaagcatctg 72
>30309_ptr-mir-301b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| |||||||||||||||||
Sbjct: 42 agcagtgcaatgatattgtcaaagcatctg 71
>30927_ppy-mir-301b:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatctg 78
||||||||||| |||||||||||||||||
Sbjct: 43 agcagtgcaatgatattgtcaaagcatctg 72
>25537_pma-mir-301a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagc 73
||||||||||| |||||||||||||
Sbjct: 58 agcagtgcaattgtattgtcaaagc 82
>34387_dre-mir-301b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtca 69
|||||||||||||||||||||
Sbjct: 47 agcagtgcaatagtattgtca 67
>26789_cfa-mir-301b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatc 76
||||||||||| |||||||||||||||
Sbjct: 41 agcagtgcaatgatattgtcaaagcatc 68
>33309_bta-mir-301b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 agcagtgcaatagtattgtcaaagcatc 76
||||||||||| |||||||||||||||
Sbjct: 51 agcagtgcaatgatattgtcaaagcatc 78
