miRNEST 2.0, an integrative microRNA resource :: BLAST
>27830_mml-mir-301b:mirbase
Length = 77
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
Query: 61 caaagcatctgggacca 77
|||||||||||||||||
Sbjct: 61 caaagcatctgggacca 77
>28554_hsa-mir-301b:mirbase
Length = 78
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 61
Query: 61 caaagcatctgggacca 77
|||||||||||||||||
Sbjct: 62 caaagcatctgggacca 78
>30927_ppy-mir-301b:mirbase
Length = 78
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 61
Query: 61 caaagcatctgggacca 77
|||||||||||||||||
Sbjct: 62 caaagcatctgggacca 78
>26789_cfa-mir-301b:mirbase
Length = 76
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 4 caggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgtcaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 caggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgtcaa 62
Query: 64 agcatctgggacca 77
|||||| |||||||
Sbjct: 63 agcatcggggacca 76
>27113_eca-mir-301b:mirbase
Length = 97
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattgt 71
Query: 61 caaagcatctgggac 75
|||||||||||||||
Sbjct: 72 caaagcatctgggac 86
>27114_eca-mir-301b:mirbase
Length = 97
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ccgcaggtgctgtgacgatgttgcactactgtgctctgagaagcagtgcaatgatattgt 71
Query: 61 caaagcatctgggac 75
|||||||||||||||
Sbjct: 72 caaagcatctgggac 86
>33309_bta-mir-301b:mirbase
Length = 95
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ccgcaggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgt 60
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 10 ccgcaggtgctctgacgaggttgcactactgtgctttgaggagcagtgcaatgatattgt 69
Query: 61 caaagcatctgggacca 77
||||||||| |||||||
Sbjct: 70 caaagcatccgggacca 86
>31981_mmu-mir-301b:mirbase
Length = 97
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 6 ggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgtcaaag 65
||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 17 ggtgctctgactaggttgcactactgtgctgtgagaagcagtgcaatggtattgtcaaag 76
Query: 66 catctgggacca 77
||||||||||||
Sbjct: 77 catctgggacca 88
>32838_rno-mir-301b:mirbase
Length = 78
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 6 ggtgctctgacgaggttgcactactgtgctctgagaagcagtgcaatgatattgtcaaag 65
||||||||||| |||||||||||||||||| || ||||||||||||| |||||||||||
Sbjct: 7 ggtgctctgactaggttgcactactgtgctgtggaaagcagtgcaatggtattgtcaaag 66
Query: 66 catctgggacca 77
||||||||||||
Sbjct: 67 catctgggacca 78
>26014_gga-mir-301:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 41 aagcagtgcaatgatattgtcaaagcat 68
|||||||||||| |||||||||||||||
Sbjct: 54 aagcagtgcaataatattgtcaaagcat 81
>25843_xtr-mir-301-1:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 48 agcagtgcaatagtattgtcaaagcatctg 77
>25844_xtr-mir-301-2:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 1e-05
Identities = 45/52 (86%), Gaps = 3/52 (5%)
Strand = Plus / Plus
Query: 20 gttgcactactgtgctctga---gaagcagtgcaatgatattgtcaaagcat 68
|||||||||||||| ||| | ||||||||||||| ||||||||||||||
Sbjct: 17 gttgcactactgtgatctcaaatgaagcagtgcaatagtattgtcaaagcat 68
>26015_gga-mir-301b:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 52 agcagtgcaatagtattgtcaaagcatctg 81
>26016_gga-mir-301b:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 52 agcagtgcaatagtattgtcaaagcatctg 81
>26521_tgu-mir-301:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 39 agcagtgcaatagtattgtcaaagcatctg 68
>26522_tgu-mir-301:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 39 agcagtgcaatagtattgtcaaagcatctg 68
>26788_cfa-mir-301a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 48 agcagtgcaatagtattgtcaaagcatctg 77
>27112_eca-mir-301a:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>27437_mdo-mir-301:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>27829_mml-mir-301a:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>28553_hsa-mir-301a:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>30308_ptr-mir-301a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>31545_oan-mir-301:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 71 agcagtgcaatagtattgtcaaagcatctg 100
>33308_bta-mir-301a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctg 71
||||||||||| |||||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatctg 78
>31857_mmu-mir-130b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 35/39 (89%), Gaps = 3/39 (7%)
Strand = Plus / Plus
Query: 20 gttgcactactgtg---ctctgagaagcagtgcaatgat 55
|||||||||||||| ||||| ||||||||||||||||
Sbjct: 24 gttgcactactgtgggcctctgggaagcagtgcaatgat 62
>32732_rno-mir-130b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 35/39 (89%), Gaps = 3/39 (7%)
Strand = Plus / Plus
Query: 20 gttgcactactgtg---ctctgagaagcagtgcaatgat 55
|||||||||||||| ||||| ||||||||||||||||
Sbjct: 24 gttgcactactgtgggcctctgggaagcagtgcaatgat 62
>32837_rno-mir-301a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatctggga 74
||||||||||| ||||||||||||||| ||||
Sbjct: 59 agcagtgcaatagtattgtcaaagcatccggga 91
>34388_dre-mir-301c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 tgctctgacgaggttgcactactgt 32
||||||||||| |||||||||||||
Sbjct: 11 tgctctgacgatgttgcactactgt 35
>31980_mmu-mir-301a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 42 agcagtgcaatgatattgtcaaagcatc 69
||||||||||| |||||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagcatc 76
>25538_pma-mir-301b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 41 aagcagtgcaatgatattgtcaaagcatctg 71
|||||||||||| ||||||||||||||||
Sbjct: 50 aagcagtgcaatagcattgtcaaagcatctg 80
