miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28562_hsa-mir-320b-1:mirbase
Length = 79
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 aattaatccctctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattaatccctctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaa 60
Query: 61 acaaattaactaattaat 78
||||||||||||||||||
Sbjct: 61 acaaattaactaattaat 78
>30933_ppy-mir-320b-1:mirbase
Length = 79
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 aattaatccctctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aattaatccctctctttctagttcttcctagagtaaggaaaagctgggttgagagggcaa 60
Query: 61 acaaattaactaattaat 78
||||||||||||||||||
Sbjct: 61 acaaattaactaattaat 78
>28564_hsa-mir-320c-1:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||| | ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 22 tctcttcccagttcttcccagagtcaggaaaagctgggttgagaggg 68
>30319_ptr-mir-320c-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||| | ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 21 tctcttcccagttcttcccagagtcaggaaaagctgggttgagaggg 67
>30935_ppy-mir-320c-1:mirbase
Length = 86
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 22 ttcttcctagagtgaggaaaagctgggttgagaggg 57
||||||| ||||| ||||||||||||||||||||||
Sbjct: 33 ttcttcccagagtcaggaaaagctgggttgagaggg 68
>28565_hsa-mir-320c-2:mirbase
Length = 50
Score = 54.0 bits (27), Expect = 1e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||||| ||||||||| ||| | |||||||||||||||||||||
Sbjct: 3 tctctttccagttcttcccagaattgggaaaagctgggttgagaggg 49
>30320_ptr-mir-320c-2:mirbase
Length = 49
Score = 54.0 bits (27), Expect = 1e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||||| ||||||||| ||| | |||||||||||||||||||||
Sbjct: 2 tctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
>28567_hsa-mir-320d-2:mirbase
Length = 48
Score = 52.0 bits (26), Expect = 6e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
>30323_ptr-mir-320d-3:mirbase
Length = 47
Score = 52.0 bits (26), Expect = 6e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
>30938_ppy-mir-320d-2:mirbase
Length = 48
Score = 52.0 bits (26), Expect = 6e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
>28563_hsa-mir-320b-2:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggcaaa 61
|||||||||||||||||||||||||
Sbjct: 70 ggaaaagctgggttgagagggcaaa 94
>30318_ptr-mir-320b-2:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggcaaa 61
|||||||||||||||||||||||||
Sbjct: 70 ggaaaagctgggttgagagggcaaa 94
>30934_ppy-mir-320b-2:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 38 gaaaagctgggttgagagggcaaa 61
||||||||||||||||||||||||
Sbjct: 71 gaaaagctgggttgagagggcaaa 94
>30936_ppy-mir-320c-2:mirbase
Length = 50
Score = 46.1 bits (23), Expect = 4e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||||| ||||||| | ||| | |||||||||||||||||||||
Sbjct: 3 tctctttccagttctttccagaattgggaaaagctgggttgagaggg 49
>26794_cfa-mir-320:mirbase
Length = 54
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 31 ggaaaagctgggttgagagggc 52
>27835_mml-mir-320:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>28561_hsa-mir-320a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>30316_ptr-mir-320a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>30322_ptr-mir-320d-2:mirbase
Length = 47
Score = 44.1 bits (22), Expect = 1e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| || |||||||| ||| |||||||||||||||||||||
Sbjct: 1 tctcttcctggttcttcccgaagtcaggaaaagctgggttgagagg 46
>30932_ppy-mir-320a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>31986_mmu-mir-320:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>32839_rno-mir-320:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>33314_bta-mir-320:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>33315_bta-mir-320-1:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 54 ggaaaagctgggttgagagggc 75
>34052_ssc-mir-320:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 41 ggaaaagctgggttgagagggc 62
>25846_xtr-mir-320:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 36 aggaaaagctgggttgagagg 56
|||||||||||||||||||||
Sbjct: 68 aggaaaagctgggttgagagg 88
>28568_hsa-mir-320e:mirbase
Length = 53
Score = 42.1 bits (21), Expect = 6e-05
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagt-gaggaaaagctgggttgaga 54
|||||| | |||||||||| |||| | ||||||||||||||||||
Sbjct: 5 tctcttcccagttcttcctggagtcggggaaaagctgggttgaga 49
>28566_hsa-mir-320d-1:mirbase
Length = 48
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 38 gaaaagctgggttgagagg 56
|||||||||||||||||||
Sbjct: 29 gaaaagctgggttgagagg 47
>30321_ptr-mir-320d-1:mirbase
Length = 47
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 38 gaaaagctgggttgagagg 56
|||||||||||||||||||
Sbjct: 29 gaaaagctgggttgagagg 47
>30937_ppy-mir-320d-1:mirbase
Length = 48
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 38 gaaaagctgggttgagagg 56
|||||||||||||||||||
Sbjct: 29 gaaaagctgggttgagagg 47
