miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00736;mir-320;AANU01203140.1/530-611 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 137 bits (69), Expect = 2e-32
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 aattaatccctctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 aattaatccctctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaa 69
Query: 61 acaaattaactaa 73
| |||||||||||
Sbjct: 70 ataaattaactaa 82
>RF00736;mir-320;ABDC01264990.1/524-443 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 61.9 bits (31), Expect = 1e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaaa 61
|||||| | |||||||||| || | ||||||||||||||||||||||||||
Sbjct: 20 tctcttcccagttcttcctggaatcaggaaaagctgggttgagagggcaaa 70
>RF00736;mir-320;AANU01221595.1/604-523 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 60.0 bits (30), Expect = 4e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 20 agttcttcctagagtgaggaaaagctgggttgagaggg 57
||||||||| ||||| ||||||||||||||||||||||
Sbjct: 29 agttcttcccagagtcaggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABDC01120233.1/908-827 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 20 agttcttcctagagtgaggaaaagctgggttgagagggcaa 60
||||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 29 agttcttcccagagtcaggaaaagctgggttgagaaggcaa 69
>RF00736;mir-320;ABDC01268212.1/395-314 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 3e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaaa 61
|||||| | ||||||||| |||| |||||||||||||||||||||||||
Sbjct: 20 tctcttcccagttcttccaggagttgggaaaagctgggttgagagggcaaa 70
>RF00736;mir-320;ABDC01304918.1/4988-5069 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 3e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 13 tctttctagttcttcctagagtgaggaaaagctgggttgagagggca 59
|||||| ||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 22 tctttccagttcttcccagagtagggaaaagctggattgagagggca 68
>RF00736;mir-320;ABDC01284545.1/2682-2601 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 3e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagagggc-aaacaaattaac 70
|||||||| |||| ||||||||||||||||||||||| ||| ||||||||
Sbjct: 30 gttcttcccggagtcaggaaaagctgggttgagagggcgaaaaaaattaac 80
>RF00736;mir-320;AAQR01641843.1/113-32 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| | ||||||||| ||||| |||||||||||| ||||||||
Sbjct: 20 tctcttcccagttcttcccagagtcaggaaaagctggcttgagagg 65
>RF00736;mir-320;AAQR01505011.1/731-650 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||||| ||||| |||||||||||||||||||||
Sbjct: 30 gttcttcccagagttgggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABDC01439707.1/377-296 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagaggg 57
||||||||| |||| |||||||||||| |||||||||
Sbjct: 30 gttcttcctggagtcaggaaaagctggtttgagaggg 66
>RF00736;mir-320;ABRT010829867.1/103-184 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 50.1 bits (25), Expect = 4e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagag 55
|||||| || |||||||| ||||| |||||||||||||||||||
Sbjct: 20 tctcttcctggttcttcccagagtctggaaaagctgggttgagag 64
>RF00736;mir-320;AANU01284683.1/8500-8420 9544:Macaca mulatta
(rhesus monkey)
Length = 81
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggcaaa 61
|||||||||||||||||||||||||
Sbjct: 45 ggaaaagctgggttgagagggcaaa 69
>RF00736;mir-320;ABDC01272608.1/588-669 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 18 ctagttcttcctagagtgaggaaaagctgggttgagagggcaaa 61
||||||||||| ||||| |||||| ||||||||| ||||||||
Sbjct: 27 ctagttcttcccagagtctggaaaatctgggttgatagggcaaa 70
>RF00736;mir-320;AANU01182454.1/3312-3230 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagt-gaggaaaagctgggttgagaggg 57
|||||| | |||||||||| |||| | |||||||||||||||||||||
Sbjct: 20 tctcttcccagttcttcctggagtcggggaaaagctgggttgagaggg 67
>RF00736;mir-320;ABDC01260937.1/591-510 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 agttcttcctagagtgaggaaaagctgggttgaga 54
|||||||||| |||| ||||||||||||||||||
Sbjct: 29 agttcttcctggagttgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01258284.1/7200-7119 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagagggca 59
||||||||| || | ||||||| ||||||||||||||||
Sbjct: 30 gttcttcctggaatcaggaaaaactgggttgagagggca 68
>RF00736;mir-320;ABDC01148153.1/3275-3194 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||| | ||||||||| ||||| | ||||||||||||| ||||||
Sbjct: 20 tctcttcccagttcttcccagagtcaagaaaagctgggttaagaggg 66
>RF00736;mir-320;AANU01221403.1/5290-5371 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||||| ||||||||| ||| | |||||||||||||||| ||||
Sbjct: 20 tctctttccagttcttcccagaattgggaaaagctgggttgacaggg 66
>RF00736;mir-320;AANU01166576.1/19424-19343 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagggcaaa 61
|||||| || ||| |||| ||||| |||||||||||| ||||||||||||
Sbjct: 20 tctcttcctggtttttcccagagtcaggaaaagctggactgagagggcaaa 70
>RF00736;mir-320;AANU01240291.1/12793-12712 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagagggca 59
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 30 gttcttcctggagttgggaaaagctgggttgagggggca 68
>RF00736;mir-320;AALT01227351.1/12789-12708 42254:Sorex araneus
(European shrew)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;AAFC03042574.1/60836-60755 9913:Bos taurus
(cattle)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABRN01191896.1/6395-6314 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABDC01218323.1/525-445 30608:Microcebus murinus
(gray mouse lemur)
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 aggaaaagctgggttgagagggcaaa 61
||||||||||||||||||| ||||||
Sbjct: 44 aggaaaagctgggttgagaaggcaaa 69
>RF00736;mir-320;ABDC01417450.1/2718-2799 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagagggc 58
|||||||| ||||| ||||||||||||| ||||||||
Sbjct: 30 gttcttcccagagttgggaaaagctgggtggagagggc 67
>RF00736;mir-320;ABDC01471401.1/633-714 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABDC01176928.1/916-835 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;AC188406.3/123881-123963 9483:Callithrix jacchus
(white-tufted-ear marmoset)
Length = 83
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 47 ggaaaagctgggttgagagggc 68
>RF00736;mir-320;AANU01202270.1/20670-20751 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| | |||||||| | |||| | |||||||||||||||||||
Sbjct: 20 tctcttcccagttcttcttggagtcaagaaaagctgggttgagagg 65
>RF00736;mir-320;AANU01107982.1/1672-1753 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
|||||| || |||||||| ||| |||||||||||||||||||||
Sbjct: 20 tctcttcctggttcttccctaagtcaggaaaagctgggttgagagg 65
>RF00736;mir-320;AAGU02695312.1/892-811 9785:Loxodonta africana
(African savanna elephant)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABRQ01139193.1/1009-1090 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggc 58
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABRT010570324.1/1410-1329 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 42.1 bits (21), Expect = 0.001
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 21 gttcttcctagagtgaggaaaagctgggttgagaggg 57
|||||| || |||| || |||||||||||||||||||
Sbjct: 30 gttctttctggagtcagaaaaagctgggttgagaggg 66
>RF00736;mir-320;AANU01211868.1/23364-23288 9544:Macaca mulatta
(rhesus monkey)
Length = 77
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 37 ggaaaagctgggttgagagggcaaa 61
|||||||||| ||||||||||||||
Sbjct: 41 ggaaaagctgcgttgagagggcaaa 65
