miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00736;mir-320;AANU01284683.1/8500-8420 9544:Macaca mulatta
(rhesus monkey)
Length = 81
Score = 135 bits (68), Expect = 2e-31
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 26 aattctgtctcttaggctttctcttcccagatttcccaaagttgggaaaagctgggttga 85
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 aattctgtctcttaggctttctcttcccagttttcccaaagttgggaaaagctgggttga 60
Query: 86 gagggcaaaagg 97
||||||||||||
Sbjct: 61 gagggcaaaagg 72
>RF00736;mir-320;ABDC01268212.1/395-314 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 65 agttgggaaaagctgggttgagagggcaaa 94
||||||||||||||||||||||||||||||
Sbjct: 41 agttgggaaaagctgggttgagagggcaaa 70
>RF00736;mir-320;AAQR01505011.1/731-650 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgagaggg 90
|||||| ||||||||||||||||||||||||||
Sbjct: 34 ttcccagagttgggaaaagctgggttgagaggg 66
>RF00736;mir-320;AAQR01688352.1/193-274 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 57 tttcccaaagttgggaaaagctgggttgaga 87
||||||| |||||||||||||||||||||||
Sbjct: 33 tttcccagagttgggaaaagctgggttgaga 63
>RF00736;mir-320;AANU01098206.1/16705-16786 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 54.0 bits (27), Expect = 5e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 44 ttctcttcccagat-ttcccaaagttgggaaaagctgggttgagagg 89
|||||||||||| | |||||||||||| |||||||||| ||||||||
Sbjct: 19 ttctcttcccagttcttcccaaagttgagaaaagctggattgagagg 65
>RF00736;mir-320;AANU01211868.1/23364-23288 9544:Macaca mulatta
(rhesus monkey)
Length = 77
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 65 agttgggaaaagctgggttgagagggcaaaa 95
||||||||||||||| |||||||||||||||
Sbjct: 36 agttgggaaaagctgcgttgagagggcaaaa 66
>RF00736;mir-320;ABDC01264990.1/524-443 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 70 ggaaaagctgggttgagagggcaaaa 95
||||||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggcaaaa 71
>RF00736;mir-320;ABDC01417450.1/2718-2799 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgagagggc 91
|||||| |||||||||||||||||| ||||||||
Sbjct: 34 ttcccagagttgggaaaagctgggtggagagggc 67
>RF00736;mir-320;ABDC01183875.1/2602-2519 30608:Microcebus murinus
(gray mouse lemur)
Length = 84
Score = 50.1 bits (25), Expect = 8e-06
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 39 aggctttctcttcccagat-ttcccaaagttgggaaaagctgggttgag 86
|||| |||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 14 aggccttctcttcccagttcttcccggagttgggaaaagctgggttgag 62
>RF00736;mir-320;AANU01203140.1/530-611 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 ggaaaagctgggttgagagggcaaa 94
|||||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggcaaa 70
>RF00736;mir-320;ABGA01011140.1/6048-5969 9601:Pongo abelii
(Sumatran orangutan)
Length = 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 65 agttgggaaaagctgggttgagagggcaaaag 96
||||||||||||||| |||||||||| |||||
Sbjct: 39 agttgggaaaagctgcgttgagagggaaaaag 70
>RF00736;mir-320;AANU01240291.1/12793-12712 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 agttgggaaaagctgggttgagagggca 92
|||||||||||||||||||||| |||||
Sbjct: 41 agttgggaaaagctgggttgagggggca 68
>RF00736;mir-320;AALT01227351.1/12789-12708 42254:Sorex araneus
(European shrew)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;AAFC03042574.1/60836-60755 9913:Bos taurus
(cattle)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABRN01191896.1/6395-6314 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABDC01304918.1/4988-5069 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgagagggca 92
|||||| ||| |||||||||||| |||||||||||
Sbjct: 34 ttcccagagtagggaaaagctggattgagagggca 68
>RF00736;mir-320;ABDC01260937.1/591-510 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 agttgggaaaagctgggttgaga 87
|||||||||||||||||||||||
Sbjct: 41 agttgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01471401.1/633-714 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABDC01176928.1/916-835 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABRT010519117.1/660-579 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 44 ttctcttcccagat-ttcccaaagttgggaaaagctgggttgagagg 89
|||||||||||| | |||| ||||||||||||| ||||||||||||
Sbjct: 19 ttctcttcccaggtcttcctgaagttgggaaaagttgggttgagagg 65
>RF00736;mir-320;AC188406.3/123881-123963 9483:Callithrix jacchus
(white-tufted-ear marmoset)
Length = 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 46 gggaaaagctgggttgagagggc 68
>RF00736;mir-320;AAGU02695312.1/892-811 9785:Loxodonta africana
(African savanna elephant)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABRQ01139193.1/1009-1090 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagagggc 91
|||||||||||||||||||||||
Sbjct: 45 gggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABDC01287788.1/350-431 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgaga 87
|||||| | |||||||||||||||||||||
Sbjct: 34 ttcccagaattgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01284545.1/2682-2601 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 ggaaaagctgggttgagagggc 91
||||||||||||||||||||||
Sbjct: 46 ggaaaagctgggttgagagggc 67
>RF00736;mir-320;ABDC01218323.1/525-445 30608:Microcebus murinus
(gray mouse lemur)
Length = 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 ggaaaagctgggttgagagggcaaaa 95
|||||||||||||||||| |||||||
Sbjct: 45 ggaaaagctgggttgagaaggcaaaa 70
>RF00736;mir-320;ABDC01363603.1/160-241 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgagagggcaaaa 95
|||||||||| ||| || |||||||| |||||||||||
Sbjct: 34 ttcccaaagtgggggaacgctgggttaagagggcaaaa 71
>RF00736;mir-320;ABRT010029256.1/7031-7102 9478:Tarsius syrichta
(Philippine tarsier)
Length = 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgagagggcaaaa 95
|||||| ||||||||||||||| ||||| ||||||||
Sbjct: 24 ttcccagagttgggaaaagctgagttgatggggcaaaa 61
>RF00736;mir-320;ABSL01055740.1/37124-37205 9606:Homo sapiens
(human)
Length = 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 agttgggaaaagctgggttgag 86
||||||||||||||||||||||
Sbjct: 41 agttgggaaaagctgggttgag 62
>RF00736;mir-320;AANU01182454.1/3312-3230 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 gggaaaagctgggttgagaggg 90
||||||||||||||||||||||
Sbjct: 46 gggaaaagctgggttgagaggg 67
>RF00736;mir-320;AANU01221403.1/5290-5371 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 58 ttcccaaagttgggaaaagctgggttgagagggcaaaa 95
|||||| | ||||||||||||||||||| |||| ||||
Sbjct: 34 ttcccagaattgggaaaagctgggttgacagggtaaaa 71
