miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28565_hsa-mir-320c-2:mirbase
Length = 50
Score = 97.6 bits (49), Expect = 6e-22
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 50
>30936_ppy-mir-320c-2:mirbase
Length = 50
Score = 89.7 bits (45), Expect = 1e-19
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2 ttctctttccagttctttccagaattgggaaaagctgggttgagagggt 50
>28564_hsa-mir-320c-1:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 2e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 21 ttctcttcccagttcttcccagagtcaggaaaagctgggttgagagggt 69
>30319_ptr-mir-320c-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 2e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 20 ttctcttcccagttcttcccagagtcaggaaaagctgggttgagagggt 68
>30937_ppy-mir-320d-1:mirbase
Length = 48
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagg 47
||||||| ||||||||||||| | ||| |||||||||||||||||||
Sbjct: 1 ttctcttcccagttcttcccaaagttgagaaaagctgggttgagagg 47
>30935_ppy-mir-320c-1:mirbase
Length = 86
Score = 58.0 bits (29), Expect = 5e-10
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||||| ||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 21 ttctcttcccacttcttcccagagtcaggaaaagctgggttgagagggt 69
>26794_cfa-mir-320:mirbase
Length = 54
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 4 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 51
>27835_mml-mir-320:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>28561_hsa-mir-320a:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>30316_ptr-mir-320a:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>30932_ppy-mir-320a:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>31986_mmu-mir-320:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>32839_rno-mir-320:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>33314_bta-mir-320:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>33315_bta-mir-320-1:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 27 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 74
>34052_ssc-mir-320:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 14 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 61
>28562_hsa-mir-320b-1:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 8e-09
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
|||||||| ||||||||| ||| | |||||||||||||||||||||
Sbjct: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
>28566_hsa-mir-320d-1:mirbase
Length = 48
Score = 54.0 bits (27), Expect = 8e-09
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 9 ccagttcttcccagaattgggaaaagctgggttgagagg 47
||||||||||||| | ||| |||||||||||||||||||
Sbjct: 9 ccagttcttcccaaagttgagaaaagctgggttgagagg 47
>30317_ptr-mir-320b-1:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 8e-09
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
|||||||| ||||||||| ||| | |||||||||||||||||||||
Sbjct: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 57
>30321_ptr-mir-320d-1:mirbase
Length = 47
Score = 54.0 bits (27), Expect = 8e-09
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 9 ccagttcttcccagaattgggaaaagctgggttgagagg 47
||||||||||||| | ||| |||||||||||||||||||
Sbjct: 9 ccagttcttcccaaagttgagaaaagctgggttgagagg 47
>30933_ppy-mir-320b-1:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 8e-09
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
|||||||| ||||||||| ||| | |||||||||||||||||||||
Sbjct: 11 tctctttctagttcttcctagagtaaggaaaagctgggttgagaggg 57
>28563_hsa-mir-320b-2:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 1e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 ttcccagaattgggaaaagctgggttgagaggg 48
|||||| | ||||||||||||||||||||||||
Sbjct: 58 ttcccaaagttgggaaaagctgggttgagaggg 90
>30318_ptr-mir-320b-2:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 1e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 ttcccagaattgggaaaagctgggttgagaggg 48
|||||| | ||||||||||||||||||||||||
Sbjct: 58 ttcccaaagttgggaaaagctgggttgagaggg 90
>30934_ppy-mir-320b-2:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 3e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 16 ttcccagaattgggaaaagctgggttgagaggg 48
|||||| | ||| ||||||||||||||||||||
Sbjct: 58 ttcccaaagttgagaaaagctgggttgagaggg 90
>25846_xtr-mir-320:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 69 ggaaaagctgggttgagagg 88
>28567_hsa-mir-320d-2:mirbase
Length = 48
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 28 ggaaaagctgggttgagagg 47
>30323_ptr-mir-320d-3:mirbase
Length = 47
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 28 ggaaaagctgggttgagagg 47
>30322_ptr-mir-320d-2:mirbase
Length = 47
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 27 ggaaaagctgggttgagagg 46
>30938_ppy-mir-320d-2:mirbase
Length = 48
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 28 ggaaaagctgggttgagagg 47
>28568_hsa-mir-320e:mirbase
Length = 53
Score = 38.2 bits (19), Expect = 5e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 27 gggaaaagctgggttgaga 45
|||||||||||||||||||
Sbjct: 31 gggaaaagctgggttgaga 49
