miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00736;mir-320;AANU01221403.1/5290-5371 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 89.7 bits (45), Expect = 3e-18
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19 ttctctttccagttcttcccagaattgggaaaagctgggttgacagggt 67
>RF00736;mir-320;AAQR01505011.1/731-650 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 67.9 bits (34), Expect = 9e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 12 gttcttcccagaattgggaaaagctgggttgagagggt 49
|||||||||||| |||||||||||||||||||||||||
Sbjct: 30 gttcttcccagagttgggaaaagctgggttgagagggt 67
>RF00736;mir-320;ABDC01287788.1/350-431 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 67.9 bits (34), Expect = 9e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 12 gttcttcccagaattgggaaaagctgggttgaga 45
||||||||||||||||||||||||||||||||||
Sbjct: 30 gttcttcccagaattgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01304918.1/4988-5069 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 65.9 bits (33), Expect = 4e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 4 tctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
|||||||||||||||||||| | |||||||||||| |||||||||
Sbjct: 22 tctttccagttcttcccagagtagggaaaagctggattgagaggg 66
>RF00736;mir-320;ABDC01268212.1/395-314 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 63.9 bits (32), Expect = 1e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttccaggagttgggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABDC01183875.1/2602-2519 30608:Microcebus murinus
(gray mouse lemur)
Length = 84
Score = 63.9 bits (32), Expect = 1e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgag 44
||||||| |||||||||||| || ||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcccggagttgggaaaagctgggttgag 62
>RF00736;mir-320;AANU01225385.1/6419-6500 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 60.0 bits (30), Expect = 2e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaag 34
||||||| ||||||||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcccagaattgggaaaag 52
>RF00736;mir-320;AANU01221595.1/604-523 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 60.0 bits (30), Expect = 2e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 4 tctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
|||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 22 tcttcccagttcttcccagagtcaggaaaagctgggttgagagggt 67
>RF00736;mir-320;ABDC01417450.1/2718-2799 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 58.0 bits (29), Expect = 9e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 12 gttcttcccagaattgggaaaagctgggttgagaggg 48
|||||||||||| |||||||||||||||| |||||||
Sbjct: 30 gttcttcccagagttgggaaaagctgggtggagaggg 66
>RF00736;mir-320;AALT01227351.1/12789-12708 42254:Sorex araneus
(European shrew)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;AAFC03042574.1/60836-60755 9913:Bos taurus
(cattle)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABRN01191896.1/6395-6314 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABDC01264990.1/524-443 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| ||||||||||| |||| |||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcctggaatcaggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABDC01471401.1/633-714 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABDC01176928.1/916-835 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;AANU01284683.1/8500-8420 9544:Macaca mulatta
(rhesus monkey)
Length = 81
Score = 56.0 bits (28), Expect = 4e-08
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| |||||| |||||| | ||||||||||||||||||||||||
Sbjct: 19 ttctcttcccagtt-ttcccaaagttgggaaaagctgggttgagaggg 65
>RF00736;mir-320;AAGU02695312.1/892-811 9785:Loxodonta africana
(African savanna elephant)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;ABRQ01139193.1/1009-1090 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 56.0 bits (28), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | ||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagaggg 66
>RF00736;mir-320;AAQR01641843.1/113-32 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagg 47
||||||| ||||||||||||||| | ||||||||||| ||||||||
Sbjct: 19 ttctcttcccagttcttcccagagtcaggaaaagctggcttgagagg 65
>RF00736;mir-320;ABDC01199707.1/8369-8288 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctggg 39
||||||| || |||||||||||||| |||||||||||||
Sbjct: 19 ttctcttcccggttcttcccagaatcgggaaaagctggg 57
>RF00736;mir-320;AANU01098206.1/16705-16786 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagg 47
||||||| ||||||||||||| | ||| |||||||||| ||||||||
Sbjct: 19 ttctcttcccagttcttcccaaagttgagaaaagctggattgagagg 65
>RF00736;mir-320;AANU01203140.1/530-611 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2 tctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
|||||||| ||||||||| ||| | |||||||||||||||||||||
Sbjct: 20 tctctttctagttcttcctagagtgaggaaaagctgggttgagaggg 66
>RF00736;mir-320;AAQR01688352.1/193-274 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 52.0 bits (26), Expect = 5e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 16 ttcccagaattgggaaaagctgggttgaga 45
|||||||| |||||||||||||||||||||
Sbjct: 34 ttcccagagttgggaaaagctgggttgaga 63
>RF00736;mir-320;CABD01063948.1/4519-4436 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 5e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgg 38
||||||| |||||||||||| ||||||||||||||||
Sbjct: 19 ttctcttcccagttcttccccaaattgggaaaagctgg 56
>RF00736;mir-320;ABDC01260937.1/591-510 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 50.1 bits (25), Expect = 2e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 9 ccagttcttcccagaattgggaaaagctgggttgaga 45
||||||||||| || |||||||||||||||||||||
Sbjct: 27 ccagttcttcctggagttgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01148153.1/3275-3194 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 50.1 bits (25), Expect = 2e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||||| ||||||||||||||| | ||||||||||||| |||||||
Sbjct: 19 ttctcttcccagttcttcccagagtcaagaaaagctgggttaagagggt 67
>RF00736;mir-320;ABDC01120233.1/908-827 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 50.1 bits (25), Expect = 2e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgaga 45
||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 19 ttctcttctcagttcttcccagagtcaggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01284545.1/2682-2601 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 48.1 bits (24), Expect = 9e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgagaggg 48
||||||| || ||||||||| || | |||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcaggaaaagctgggttgagaggg 66
>RF00736;mir-320;AANU01240291.1/12793-12712 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 48.1 bits (24), Expect = 9e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgag 44
||||||| || |||||||| || ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcctggagttgggaaaagctgggttgag 62
>RF00736;mir-320;AAQR01487325.1/287-368 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 3 ctctttccagttcttcccagaattgggaaaagctgggttgagagggt 49
||||| || ||||||||| || |||||||| |||||||||||||||
Sbjct: 21 ctcttcccggttcttccctgagatgggaaaacctgggttgagagggt 67
>RF00736;mir-320;ABRT010829867.1/103-184 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 gttcttcccagaattgggaaaagctgggttgagag 46
|||||||||||| | |||||||||||||||||||
Sbjct: 30 gttcttcccagagtctggaaaagctgggttgagag 64
>RF00736;mir-320;AANU01182454.1/3312-3230 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 gggaaaagctgggttgagagggt 49
|||||||||||||||||||||||
Sbjct: 46 gggaaaagctgggttgagagggt 68
>RF00736;mir-320;ABRT010029256.1/7031-7102 9478:Tarsius syrichta
(Philippine tarsier)
Length = 72
Score = 44.1 bits (22), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tcttcccagaattgggaaaagctgggttga 43
|||||||||| ||||||||||||| |||||
Sbjct: 22 tcttcccagagttgggaaaagctgagttga 51
>RF00736;mir-320;AC188406.3/123881-123963 9483:Callithrix jacchus
(white-tufted-ear marmoset)
Length = 83
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 27 gggaaaagctgggttgagaggg 48
||||||||||||||||||||||
Sbjct: 46 gggaaaagctgggttgagaggg 67
>RF00736;mir-320;AAQR01511833.1/557-477 30611:Otolemur garnettii
(small-eared galago)
Length = 81
Score = 42.1 bits (21), Expect = 5e-04
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctgggttgaga 45
||||||| |||||||| |||||| | ||||||||||| |||||||
Sbjct: 19 ttctcttcccagttctccccaga-tcgggaaaagctgagttgaga 62
>RF00736;mir-320;ABRT010244618.1/3844-3768 9478:Tarsius syrichta
(Philippine tarsier)
Length = 77
Score = 42.1 bits (21), Expect = 5e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 ttctctttccagttcttcccagaattgggaaaagctg 37
||||||| | |||||||||||| |||||||||||||
Sbjct: 19 ttctcttcctagttcttcccagtgttgggaaaagctg 55
