miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00736;mir-320;AANU01098206.1/16705-16786 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 77.8 bits (39), Expect = 9e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 19 ttctcttcccagttcttcccaaagttgagaaaagctggattgagagg 65
>RF00736;mir-320;AANU01284683.1/8500-8420 9544:Macaca mulatta
(rhesus monkey)
Length = 81
Score = 61.9 bits (31), Expect = 5e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||||||| |||||||||||| |||||||||||||||||||
Sbjct: 19 ttctcttcccagtt-ttcccaaagttgggaaaagctgggttgagagg 64
>RF00736;mir-320;AAQR01505011.1/731-650 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 58.0 bits (29), Expect = 8e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 7 tcccagttcttcccaaagttgagaaaagctgggttgagagg 47
|||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 25 tcccggttcttcccagagttgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01183875.1/2602-2519 30608:Microcebus murinus
(gray mouse lemur)
Length = 84
Score = 56.0 bits (28), Expect = 3e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgag 44
||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcccggagttgggaaaagctgggttgag 62
>RF00736;mir-320;ABDC01268212.1/395-314 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| ||||||||||||| ||||| |||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttccaggagttgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01148153.1/3275-3194 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| ||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 19 ttctcttcccagttcttcccagagtcaagaaaagctgggttaagagg 65
>RF00736;mir-320;AANU01221595.1/604-523 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 50.1 bits (25), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 7 tcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 25 tcccagttcttcccagagtcaggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01417450.1/2718-2799 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 48.1 bits (24), Expect = 8e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 12 gttcttcccaaagttgagaaaagctgggttgagagg 47
|||||||||| ||||| |||||||||||| ||||||
Sbjct: 30 gttcttcccagagttgggaaaagctgggtggagagg 65
>RF00736;mir-320;AALT01227351.1/12789-12708 42254:Sorex araneus
(European shrew)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;AAFC03042574.1/60836-60755 9913:Bos taurus
(cattle)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABRN01191896.1/6395-6314 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;AAQR01641843.1/113-32 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| ||||||||||||||| ||| |||||||||| ||||||||
Sbjct: 19 ttctcttcccagttcttcccagagtcaggaaaagctggcttgagagg 65
>RF00736;mir-320;AAQR01716596.1/1646-1566 30611:Otolemur garnettii
(small-eared galago)
Length = 81
Score = 46.1 bits (23), Expect = 3e-05
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||| ||| ||||||||||||||| ||||||||||
Sbjct: 19 ttctcttcccggttctgccctaagttgagaaaagct-ggttgagagg 64
>RF00736;mir-320;ABDC01304918.1/4988-5069 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 9 ccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||||||||||| ||| | |||||||||| ||||||||
Sbjct: 27 ccagttcttcccagagtagggaaaagctggattgagagg 65
>RF00736;mir-320;ABDC01471401.1/633-714 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01176928.1/916-835 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABRT010519117.1/660-579 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||||| |||||| |||||| |||||| ||||||||||||
Sbjct: 19 ttctcttcccaggtcttcctgaagttgggaaaagttgggttgagagg 65
>RF00736;mir-320;CABD01026707.1/5824-5766 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 59
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| || ||||||||||| ||||| ||||||||| |||||||||
Sbjct: 2 ttctcttctcagttcttccccaagttaggaaaagctgagttgagagg 48
>RF00736;mir-320;AANU01221403.1/5290-5371 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 9 ccagttcttcccaaagttgagaaaagctgggttga 43
||||||||||||| | ||| |||||||||||||||
Sbjct: 27 ccagttcttcccagaattgggaaaagctgggttga 61
>RF00736;mir-320;AAGU02695312.1/892-811 9785:Loxodonta africana
(African savanna elephant)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABRQ01139193.1/1009-1090 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||| |||| ||||||||| ||| | |||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;AAQR01688352.1/193-274 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 44.1 bits (22), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 ttcccaaagttgagaaaagctgggttgaga 45
|||||| ||||| |||||||||||||||||
Sbjct: 34 ttcccagagttgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01287788.1/350-431 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 1e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 gttcttcccaaagttgagaaaagctgggttgaga 45
|||||||||| | ||| |||||||||||||||||
Sbjct: 30 gttcttcccagaattgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01260937.1/591-510 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 44.1 bits (22), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 8 cccagttcttcccaaagttgagaaaagctgggttgaga 45
|||||||||||| ||||| |||||||||||||||||
Sbjct: 26 cccagttcttcctggagttgggaaaagctgggttgaga 63
>RF00736;mir-320;CABD01063948.1/4519-4436 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgg 38
||||| |||||||||||||| || ||| ||||||||||
Sbjct: 19 ttctcttcccagttcttccccaaattgggaaaagctgg 56
>RF00736;mir-320;ABDC01120233.1/908-827 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 42.1 bits (21), Expect = 5e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 1 ttctcgtcccagttcttcccaaagttgagaaaagctgggttgaga 45
||||| || |||||||||||| ||| |||||||||||||||||
Sbjct: 19 ttctcttctcagttcttcccagagtcaggaaaagctgggttgaga 63
>RF00736;mir-320;ABRT010754932.1/670-590 9478:Tarsius syrichta
(Philippine tarsier)
Length = 81
Score = 42.1 bits (21), Expect = 5e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 7 tcccagttcttcccaaagttgagaaaagctgggttgagagg 47
||||||||||||| |||||| | |||| ||||||||||||
Sbjct: 24 tcccagttcttcctgaagttgggtaaagttgggttgagagg 64
>RF00736;mir-320;AC188406.3/123881-123963 9483:Callithrix jacchus
(white-tufted-ear marmoset)
Length = 83
Score = 42.1 bits (21), Expect = 5e-04
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 8 cccagttcttcccaaagttgag-aaaagctgggttgagagg 47
|||||||||||||| ||| | | ||||||||||||||||||
Sbjct: 26 cccagttcttcccatagtcggggaaaagctgggttgagagg 66
