miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28567_hsa-mir-320d-2:mirbase
Length = 48
Score = 93.7 bits (47), Expect = 9e-21
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
>30938_ppy-mir-320d-2:mirbase
Length = 48
Score = 93.7 bits (47), Expect = 9e-21
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
>28564_hsa-mir-320c-1:mirbase
Length = 88
Score = 69.9 bits (35), Expect = 1e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21 ttctcttcccagttcttcccagagtcaggaaaagctgggttgagagg 67
>30319_ptr-mir-320c-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 1e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 20 ttctcttcccagttcttcccagagtcaggaaaagctgggttgagagg 66
>26794_cfa-mir-320:mirbase
Length = 54
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 4 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 50
>27835_mml-mir-320:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>28561_hsa-mir-320a:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>30316_ptr-mir-320a:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>30932_ppy-mir-320a:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>30935_ppy-mir-320c-1:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 21 ttctcttcccacttcttcccagagtcaggaaaagctgggttgagagg 67
>31986_mmu-mir-320:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>32839_rno-mir-320:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>33314_bta-mir-320:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>33315_bta-mir-320-1:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 27 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 73
>34052_ssc-mir-320:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 3e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 14 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 60
>28568_hsa-mir-320e:mirbase
Length = 53
Score = 60.0 bits (30), Expect = 1e-10
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtc-aggaaaagctgggttgaga 45
|||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 4 ttctcttcccagttcttcctggagtcggggaaaagctgggttgaga 49
>28562_hsa-mir-320b-1:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
>30317_ptr-mir-320b-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 11 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 56
>30322_ptr-mir-320d-2:mirbase
Length = 47
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||| ||||||| | |||||||||||||||||||||||||
Sbjct: 1 tctcttcctggttcttcccgaagtcaggaaaagctgggttgagagg 46
>30933_ppy-mir-320b-1:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 11 tctctttctagttcttcctagagtaaggaaaagctgggttgagagg 56
>25846_xtr-mir-320:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 3e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 aggaaaagctgggttgagagg 47
|||||||||||||||||||||
Sbjct: 68 aggaaaagctgggttgagagg 88
>28563_hsa-mir-320b-2:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 70 ggaaaagctgggttgagagg 89
>28565_hsa-mir-320c-2:mirbase
Length = 50
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 29 ggaaaagctgggttgagagg 48
>30318_ptr-mir-320b-2:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 70 ggaaaagctgggttgagagg 89
>30320_ptr-mir-320c-2:mirbase
Length = 49
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 28 ggaaaagctgggttgagagg 47
>30936_ppy-mir-320c-2:mirbase
Length = 50
Score = 40.1 bits (20), Expect = 1e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ggaaaagctgggttgagagg 47
||||||||||||||||||||
Sbjct: 29 ggaaaagctgggttgagagg 48
>28566_hsa-mir-320d-1:mirbase
Length = 48
Score = 38.2 bits (19), Expect = 4e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gaaaagctgggttgagagg 47
|||||||||||||||||||
Sbjct: 29 gaaaagctgggttgagagg 47
>30321_ptr-mir-320d-1:mirbase
Length = 47
Score = 38.2 bits (19), Expect = 4e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gaaaagctgggttgagagg 47
|||||||||||||||||||
Sbjct: 29 gaaaagctgggttgagagg 47
>30934_ppy-mir-320b-2:mirbase
Length = 138
Score = 38.2 bits (19), Expect = 4e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gaaaagctgggttgagagg 47
|||||||||||||||||||
Sbjct: 71 gaaaagctgggttgagagg 89
>30937_ppy-mir-320d-1:mirbase
Length = 48
Score = 38.2 bits (19), Expect = 4e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gaaaagctgggttgagagg 47
|||||||||||||||||||
Sbjct: 29 gaaaagctgggttgagagg 47
