miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00736;mir-320;AANU01202270.1/20670-20751 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 85.7 bits (43), Expect = 4e-17
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcttggagtcaagaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01264990.1/524-443 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 77.8 bits (39), Expect = 9e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcctggaatcaggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01284545.1/2682-2601 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 69.9 bits (35), Expect = 2e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcaggaaaagctgggttgagagg 65
>RF00736;mir-320;AANU01182454.1/3312-3230 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 63.9 bits (32), Expect = 1e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtc-aggaaaagctgggttgagagg 47
|||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcctggagtcggggaaaagctgggttgagagg 66
>RF00736;mir-320;AANU01221595.1/604-523 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 63.9 bits (32), Expect = 1e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 4 tcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 22 tcttcccagttcttcccagagtcaggaaaagctgggttgagagg 65
>RF00736;mir-320;AALT01227351.1/12789-12708 42254:Sorex araneus
(European shrew)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;AAFC03042574.1/60836-60755 9913:Bos taurus
(cattle)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABRN01191896.1/6395-6314 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;AAQR01641843.1/113-32 30611:Otolemur garnettii
(small-eared galago)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 19 ttctcttcccagttcttcccagagtcaggaaaagctggcttgagagg 65
>RF00736;mir-320;ABDC01268212.1/395-314 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccagttcttccaggagttgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01258284.1/7200-7119 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||| ||||||||| |||||||||||||
Sbjct: 19 ttctcttcccggttcttcctggaatcaggaaaaactgggttgagagg 65
>RF00736;mir-320;ABDC01471401.1/633-714 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01439707.1/377-296 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
||||||||| ||||||| ||||||||||||||||||| ||||||||
Sbjct: 19 ttctcttccaggttcttcctggagtcaggaaaagctggtttgagagg 65
>RF00736;mir-320;ABDC01176928.1/916-835 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABRT010570324.1/1410-1329 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 19 ttctcttccctgttctttctggagtcagaaaaagctgggttgagagg 65
>RF00736;mir-320;AAGU02695312.1/892-811 9785:Loxodonta africana
(African savanna elephant)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABRQ01139193.1/1009-1090 9813:Procavia capensis
(cape rock hyrax)
Length = 82
Score = 61.9 bits (31), Expect = 5e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcccggagtcgggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01260937.1/591-510 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 58.0 bits (29), Expect = 8e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgaga 45
|||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 19 ttctctccccagttcttcctggagttgggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01218323.1/525-445 30608:Microcebus murinus
(gray mouse lemur)
Length = 81
Score = 58.0 bits (29), Expect = 8e-09
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgaga 45
|||||||| |||||||||| ||| |||||||||||||||||||||
Sbjct: 19 ttctcttctcagttcttct-ggaatcaggaaaagctgggttgaga 62
>RF00736;mir-320;ABDC01120233.1/908-827 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 58.0 bits (29), Expect = 8e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgaga 45
|||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 19 ttctcttctcagttcttcccagagtcaggaaaagctgggttgaga 63
>RF00736;mir-320;ABDC01183875.1/2602-2519 30608:Microcebus murinus
(gray mouse lemur)
Length = 84
Score = 56.0 bits (28), Expect = 3e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgag 44
|||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 19 ttctcttcccagttcttcccggagttgggaaaagctgggttgag 62
>RF00736;mir-320;AANU01240291.1/12793-12712 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 56.0 bits (28), Expect = 3e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgag 44
|||||||||| ||||||| |||||| |||||||||||||||||
Sbjct: 19 ttctcttcccggttcttcctggagttgggaaaagctgggttgag 62
>RF00736;mir-320;ABDC01148153.1/3275-3194 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 19 ttctcttcccagttcttcccagagtcaagaaaagctgggttaagagg 65
>RF00736;mir-320;AANU01203140.1/530-611 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 52.0 bits (26), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 tctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||| | |||||||| | |||| |||||||||||||||||||||
Sbjct: 20 tctctttctagttcttcctagagtgaggaaaagctgggttgagagg 65
>RF00736;mir-320;ABDC01023147.1/177-96 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 50.1 bits (25), Expect = 2e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaa 33
|||||||||||||||||| ||||||| ||||||
Sbjct: 19 ttctcttcccagttcttcctggagtcgggaaaa 51
>RF00736;mir-320;AANU01107982.1/1672-1753 9544:Macaca mulatta
(rhesus monkey)
Length = 82
Score = 50.1 bits (25), Expect = 2e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 agtcaggaaaagctgggttgagagg 47
|||||||||||||||||||||||||
Sbjct: 41 agtcaggaaaagctgggttgagagg 65
>RF00736;mir-320;ABSL01055740.1/37124-37205 9606:Homo sapiens
(human)
Length = 82
Score = 48.1 bits (24), Expect = 8e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgag 44
|||||||||| || |||| |||||| |||||||||||||||||
Sbjct: 19 ttctcttcccggtccttcctggagttgggaaaagctgggttgag 62
>RF00736;mir-320;ABRT010519117.1/660-579 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 46.1 bits (23), Expect = 3e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||| ||||| || ||| ||||||| ||||||||||||
Sbjct: 19 ttctcttcccaggtcttcctgaagttgggaaaagttgggttgagagg 65
>RF00736;mir-320;ABDC01497176.1/772-854 30608:Microcebus murinus
(gray mouse lemur)
Length = 83
Score = 44.1 bits (22), Expect = 1e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgg 38
||||||||| ||||||||| |||||| |||||||||||
Sbjct: 19 ttctcttcctagttcttct-ggagtccggaaaagctgg 55
>RF00736;mir-320;ABRT010829867.1/103-184 9478:Tarsius syrichta
(Philippine tarsier)
Length = 82
Score = 44.1 bits (22), Expect = 1e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 1 ttctcttcccagttcttcttggagtcaggaaaagctgggttgagag 46
||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 19 ttctcttcctggttcttcccagagtctggaaaagctgggttgagag 64
>RF00736;mir-320;ABDC01127582.1/5308-5389 30608:Microcebus murinus
(gray mouse lemur)
Length = 82
Score = 42.1 bits (21), Expect = 5e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 23 agtcaggaaaagctgggttgagagg 47
||||||||| |||||||||||||||
Sbjct: 41 agtcaggaatagctgggttgagagg 65
>RF00736;mir-320;ABRT010754932.1/670-590 9478:Tarsius syrichta
(Philippine tarsier)
Length = 81
Score = 42.1 bits (21), Expect = 5e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 3 ctcttcccagttcttcttggagtcaggaaaagctgggttgagagg 47
|||||||||||||||| || ||| || |||| ||||||||||||
Sbjct: 20 ctcttcccagttcttcctgaagttgggtaaagttgggttgagagg 64
