miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28577_hsa-mir-328:mirbase
Length = 75
Score = 121 bits (61), Expect = 7e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
Query: 74 t 74
|
Sbjct: 74 t 74
>30945_ppy-mir-328:mirbase
Length = 75
Score = 105 bits (53), Expect = 4e-24
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 14 caggaggagctcagggagaaagtgcatgcagcccctggccctctctgcccttccgtcccc 73
Query: 74 t 74
|
Sbjct: 74 t 74
>31995_mmu-mir-328:mirbase
Length = 97
Score = 97.6 bits (49), Expect = 1e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 27 caggaggggctcagggagaaagtatctacagcccctggccctctctgcccttccgtcccc 86
Query: 74 t 74
|
Sbjct: 87 t 87
>27124_eca-mir-328:mirbase
Length = 71
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtccc 72
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 13 caggaggggctcagggagaaagtgtgtgcagcccctggccctctctgcccttccgtccc 71
>32848_rno-mir-328a:mirbase
Length = 84
Score = 89.7 bits (45), Expect = 2e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 14 caggaggggctcagggagaaagcatctacagcccctggccctctctgcccttccgtcccc 73
Query: 74 t 74
|
Sbjct: 74 t 74
>34057_ssc-mir-328:mirbase
Length = 80
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
|||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 13 caggaggggctcagggagaaagtgtgtgccgcccctggccctctctgcccttccgtcccc 72
>33320_bta-mir-328:mirbase
Length = 92
Score = 81.8 bits (41), Expect = 6e-17
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgtcccc 73
||||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||
Sbjct: 27 caggaggggctcagggagatagtgtgtgctgcccctggccctctctgcccttccgtcccc 86
Query: 74 t 74
|
Sbjct: 87 t 87
>26799_cfa-mir-328:mirbase
Length = 63
Score = 79.8 bits (40), Expect = 2e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 14 caggaggggctcagggagaaagtgcatacagcccctggccctctctgcccttccgt 69
||||| |||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 8 caggaagggctcagggagaaagtgtgtgcagcccctggccctctctgcccttccgt 63
