miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28578_hsa-mir-329-1:mirbase
Length = 80
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 61
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 62 taacctcttttccagtatc 80
>26801_cfa-mir-329b:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 61
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 62 taacctcttttccagtatc 80
>28579_hsa-mir-329-2:mirbase
Length = 84
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4 gtacctgaagagaggttttctgggtttctgtttctttattgaggacgaaacacacctggt 63
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 64 taacctcttttccagtatc 82
>30946_ppy-mir-329-1:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 61
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 62 taacctcttttccagtatc 80
>33322_bta-mir-329b:mirbase
Length = 83
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 62
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 63 taacctcttttccagtatc 81
>33811_oar-mir-329b:mirbase
Length = 124
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 31 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 90
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 91 taacctcttttccagtatc 109
>33812_oar-mir-329b:mirbase
Length = 124
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 31 gtacctgaagagaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 90
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 91 taacctcttttccagtatc 109
>27841_mml-mir-329-1:mirbase
Length = 84
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4 gtacctgaagggaggttttctgggtttctgtttctttaatgaggatgaaacacacctggt 63
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 64 taacctcttttccagtatc 82
>30329_ptr-mir-329-2:mirbase
Length = 79
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 1 gtacctgaagagaggttttctgggtttctgtttctttattgaggatgaaacacacctggt 60
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 61 taacctcttttccagtatc 79
>30947_ppy-mir-329-2:mirbase
Length = 83
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 4 gtacctgaagagaggttttctgggtttctgtttctttattgaggatgaaacacacctggt 63
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 64 taacctcttttccagtatc 82
>27125_eca-mir-329:mirbase
Length = 98
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 14 gtacctgaagagaggttttctgggtttctgtttctttaatgaagatgaaacacacctagt 73
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 74 taacctcttttccagtatc 92
>27842_mml-mir-329-2:mirbase
Length = 80
Score = 125 bits (63), Expect = 5e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||||
Sbjct: 2 gtacctgaagggaggttttctgggtctctgtttctttactgaggatgaaacacacctggt 61
Query: 61 taacctcttttccagtatc 79
|||||||||||||||||||
Sbjct: 62 taacctcttttccagtatc 80
>33321_bta-mir-329a:mirbase
Length = 83
Score = 101 bits (51), Expect = 7e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||| ||| |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 4 gtacttgaggagaggttttctaggtctctgtttctttcatgaggatgaaacacacctggt 63
Query: 61 taacctcttttccagtatc 79
|||||| ||||||||||||
Sbjct: 64 taaccttttttccagtatc 82
>33809_oar-mir-329a:mirbase
Length = 104
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||| ||| |||||||||||| ||| || |||||||| ||||||| ||||||||||||||
Sbjct: 12 gtacttgaggagaggttttctaggtctccgtttctttcatgaggatgaaacacacctggt 71
Query: 61 taacctcttttccagtatc 79
|||||| ||||||||||||
Sbjct: 72 taaccttttttccagtatc 90
>33810_oar-mir-329a:mirbase
Length = 104
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
|||| ||| |||||||||||| ||| || |||||||| ||||||| ||||||||||||||
Sbjct: 12 gtacttgaggagaggttttctaggtctccgtttctttcatgaggatgaaacacacctggt 71
Query: 61 taacctcttttccagtatc 79
|||||| ||||||||||||
Sbjct: 72 taaccttttttccagtatc 90
>26800_cfa-mir-329a:mirbase
Length = 60
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 11 agaggttttctgggtttctgtttctttaatgaggacgaaacacacctggttaacctcttt 70
||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||
Sbjct: 1 agaggttttctgggtttctgtttctttcatgaggatgaaacacacccagttaacctcttt 60
>31996_mmu-mir-329:mirbase
Length = 97
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||| ||||||||||||||||||| ||||||||||| ||||| | |||||||||| |
Sbjct: 13 gtaccggaagagaggttttctgggtctctgtttctttgatgagaatgaaacacacccagc 72
Query: 61 taacctcttttccagtatc 79
|||||| |||| |||||||
Sbjct: 73 taacctttttttcagtatc 91
>32850_rno-mir-329:mirbase
Length = 97
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 1 gtacctgaagagaggttttctgggtttctgtttctttaatgaggacgaaacacacctggt 60
||||| ||||||||||||||||||| ||||||||||| ||||| | |||||||||| |
Sbjct: 13 gtaccggaagagaggttttctgggtctctgtttctttgatgagaatgaaacacacccagc 72
Query: 61 taacctcttttccagtatc 79
|||||| |||| |||||||
Sbjct: 73 taacctttttttcagtatc 91
