miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28582_hsa-mir-331:mirbase
Length = 94
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatcctagaaccaacctaagctc 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 cccctgggcctatcctagaaccaacctaagctc 94
>28583_hsa-mir-331:mirbase
Length = 94
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatcctagaaccaacctaagctc 93
|||||||||||||||||||||||||||||||||
Sbjct: 62 cccctgggcctatcctagaaccaacctaagctc 94
>26803_cfa-mir-331:mirbase
Length = 90
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||||||
Sbjct: 62 cccctgggcctatcctagaaccaacctaa 90
>27845_mml-mir-331:mirbase
Length = 94
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||||||
Sbjct: 62 cccctgggcctatcctagaaccaacctaa 90
>27846_mml-mir-331:mirbase
Length = 94
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||||||
Sbjct: 62 cccctgggcctatcctagaaccaacctaa 90
>33324_bta-mir-331:mirbase
Length = 90
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||||||
Sbjct: 62 cccctgggcctatcctagaaccaacctaa 90
>27127_eca-mir-331:mirbase
Length = 92
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 3 tttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcc 63
Query: 63 cctgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||||
Sbjct: 64 cctgggcctatcctagaaccaacctaa 90
>31998_mmu-mir-331:mirbase
Length = 96
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 tggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccc 65
Query: 65 tgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||
Sbjct: 66 tgggcctatcctagaaccaacctaa 90
>31999_mmu-mir-331:mirbase
Length = 96
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 tggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccc 65
Query: 65 tgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||
Sbjct: 66 tgggcctatcctagaaccaacctaa 90
>32852_rno-mir-331:mirbase
Length = 96
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 5 tggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccc 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tggtcttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccc 65
Query: 65 tgggcctatcctagaaccaacctaa 89
|||||||||||||||||||||||||
Sbjct: 66 tgggcctatcctagaaccaacctaa 90
>34058_ssc-mir-331:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 10 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 60
Query: 70 ctatcctagaaccaacctaa 89
||||||||||||||||||||
Sbjct: 61 ctatcctagaaccaacctaa 80
>34059_ssc-mir-331:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 10 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccaggcccctgggc 60
Query: 70 ctatcctagaaccaacctaa 89
||||||||||||||||||||
Sbjct: 61 ctatcctagaaccaacctaa 80
>30950_ppy-mir-331:mirbase
Length = 88
Score = 153 bits (77), Expect = 3e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatccta 77
|||||||||||||||||
Sbjct: 62 cccctgggcctatccta 78
>30951_ppy-mir-331:mirbase
Length = 88
Score = 153 bits (77), Expect = 3e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttggttttgtttgggtttgttctaggtatggtcccagggatcccagatcaaaccagg 61
Query: 61 cccctgggcctatccta 77
|||||||||||||||||
Sbjct: 62 cccctgggcctatccta 78
