miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27848_mml-mir-337:mirbase
Length = 93
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttcaa 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tcctatatgatgcctttcttcatccccttcaa 93
>27849_mml-mir-337:mirbase
Length = 93
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttcaa 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tcctatatgatgcctttcttcatccccttcaa 93
>28586_hsa-mir-337:mirbase
Length = 93
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttcaa 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tcctatatgatgcctttcttcatccccttcaa 93
>28585_hsa-mir-337:mirbase
Length = 93
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttcaa 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tcctatatgatgcctttcttcatccccttcaa 93
>30953_ppy-mir-337:mirbase
Length = 93
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttcaa 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tcctatatgatgcctttcttcatccccttcaa 93
>30954_ppy-mir-337:mirbase
Length = 93
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttcaa 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tcctatatgatgcctttcttcatccccttcaa 93
>32855_rno-mir-337:mirbase
Length = 97
Score = 105 bits (53), Expect = 5e-24
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 agttggggggtgggaacggcttcatacaggagttgat-gcacagttatccagctcctata 67
|||||||||||||||||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct: 13 agttggggggtgggaacggcgtcatgcaggagttgattgcacagccattcagctcctata 72
Query: 68 tgatgcctttcttcatccccttcaa 92
||||||||||||||| |||||||||
Sbjct: 73 tgatgcctttcttcacccccttcaa 97
>33030_rno-mir-3544:mirbase
Length = 88
Score = 105 bits (53), Expect = 5e-24
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 9 agttggggggtgggaacggcttcatacaggagttgat-gcacagttatccagctcctata 67
|||||||||||||||||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct: 88 agttggggggtgggaacggcgtcatgcaggagttgattgcacagccattcagctcctata 29
Query: 68 tgatgcctttcttcatccccttcaa 92
||||||||||||||| |||||||||
Sbjct: 28 tgatgcctttcttcacccccttcaa 4
>32002_mmu-mir-337:mirbase
Length = 97
Score = 103 bits (52), Expect = 2e-23
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 agttggggggtgggaacggcttcatacaggagttgat-gcacagttatccagctcctata 67
|||||||||||||||||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct: 14 agttggggggtgggaacggcgtcatgcaggagttgattgcacagccattcagctcctata 73
Query: 68 tgatgcctttcttcatccccttca 91
||||||||||||||| ||||||||
Sbjct: 74 tgatgcctttcttcacccccttca 97
>32003_mmu-mir-337:mirbase
Length = 97
Score = 103 bits (52), Expect = 2e-23
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 agttggggggtgggaacggcttcatacaggagttgat-gcacagttatccagctcctata 67
|||||||||||||||||||| |||| ||||||||||| |||||| || |||||||||||
Sbjct: 14 agttggggggtgggaacggcgtcatgcaggagttgattgcacagccattcagctcctata 73
Query: 68 tgatgcctttcttcatccccttca 91
||||||||||||||| ||||||||
Sbjct: 74 tgatgcctttcttcacccccttca 97
>27129_eca-mir-337:mirbase
Length = 92
Score = 101 bits (51), Expect = 8e-23
Identities = 82/91 (90%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
|||||||||| ||||||||| ||||||||||||||||||| |||||| |||||| |||||
Sbjct: 2 tagtcagtaggtggggggtgagaacggcttcatacaggagctgatgcgcagttacccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttca 91
|||||| |||||||||| ||| ||||||||
Sbjct: 62 tcctatgagatgcctttcctca-ccccttca 91
>27130_eca-mir-337:mirbase
Length = 92
Score = 101 bits (51), Expect = 8e-23
Identities = 82/91 (90%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 1 tagtcagtagttggggggtgggaacggcttcatacaggagttgatgcacagttatccagc 60
|||||||||| ||||||||| ||||||||||||||||||| |||||| |||||| |||||
Sbjct: 2 tagtcagtaggtggggggtgagaacggcttcatacaggagctgatgcgcagttacccagc 61
Query: 61 tcctatatgatgcctttcttcatccccttca 91
|||||| |||||||||| ||| ||||||||
Sbjct: 62 tcctatgagatgcctttcctca-ccccttca 91
