miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 186 bits (94), Expect = 2e-48
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 186 bits (94), Expect = 2e-48
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 186 bits (94), Expect = 2e-48
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 182 bits (92), Expect = 4e-47
Identities = 104/108 (96%)
Strand = Plus / Plus
Query: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agagtgttcaaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 170 bits (86), Expect = 1e-43
Identities = 104/110 (94%)
Strand = Plus / Plus
Query: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
|||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 1 agagtgatcaaggacagcaagaaaaatgagggactttcaggggcagctgtgtttcctgac 60
Query: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatcgg 110
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 167 bits (84), Expect = 2e-42
Identities = 102/108 (94%)
Strand = Plus / Plus
Query: 1 agagtgttcaaggatagcaagaaaaatgagggactttctggggcagctgtgttttctgac 60
|||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 agagtgctcgaggacagcaagaaaaatgagggactttcaggggcagctgtgttttctgac 60
Query: 61 ttagtcttaatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtcataatgcccctaaaaatccttattgttcttgcagtgtgcatc 108
>32883_rno-mir-365:mirbase
Length = 86
Score = 135 bits (68), Expect = 7e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgttttctgacttagtcttaatgccc 75
||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||
Sbjct: 3 agcaagaaaaatgagggactttcaggggcagctgtgtttcctgactcagtcataatgccc 62
Query: 76 ctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||
Sbjct: 63 ctaaaaatccttattgttcttgca 86
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 22 aaaaatgagggactttctggggcagctgtgttttctgacttagtcttaatgcccctaaaa 81
||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgttttctgactcagtcataatgcccctaaaa 60
Query: 82 atccttattgttcttgcagt 101
||||||||||||||||||||
Sbjct: 61 atccttattgttcttgcagt 80
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 22 aaaaatgagggactttctggggcagctgtgttttctgacttagtcttaatgcccctaaaa 81
||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgttttctgactcagtcataatgcccctaaaa 60
Query: 82 atccttattgttcttgcagt 101
||||||||||||||||||||
Sbjct: 61 atccttattgttcttgcagt 80
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 113 bits (57), Expect = 3e-26
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
||||||||||||||||||||||| |||||||||||||||| || || |||| |||||||
Sbjct: 4 agcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcc 63
Query: 75 cctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||||
Sbjct: 64 cctaaaaatccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 113 bits (57), Expect = 3e-26
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
||||||||||||||||||||||| |||||||||||||||| || || |||| |||||||
Sbjct: 28 agcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcc 87
Query: 75 cctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||||
Sbjct: 88 cctaaaaatccttattgttcttgca 112
>27146_eca-mir-365:mirbase
Length = 66
Score = 107 bits (54), Expect = 2e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 25 aatgagggactttctggggcagctgtgttttctgacttagtcttaatgcccctaaaaatc 84
|||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 1 aatgagggactttcaggggcagctgtgttttctgactcagtcataatgcccctaaaaatc 60
Query: 85 cttatt 90
||||||
Sbjct: 61 cttatt 66
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 95.6 bits (48), Expect = 6e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
|||||||||| ||||||||||| |||||||||||||| | ||||| |||| |||||||
Sbjct: 6 agcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgcc 65
Query: 75 cctaaaaatccttattgttcttgcagtg 102
||||||||||||||||| ||||||||||
Sbjct: 66 cctaaaaatccttattgctcttgcagtg 93
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 95.6 bits (48), Expect = 6e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
|||||||||| ||||||||||| |||||||||||||| | ||||| |||| |||||||
Sbjct: 6 agcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgcc 65
Query: 75 cctaaaaatccttattgttcttgcagtg 102
||||||||||||||||| ||||||||||
Sbjct: 66 cctaaaaatccttattgctcttgcagtg 93
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 89.7 bits (45), Expect = 4e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
|||||||||||||||||||||| |||||||||||||||| | || |||| |||||||
Sbjct: 5 agcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcc 64
Query: 75 cctaaaaatccttattgttcttgca 99
||||||||||||||||| |||||||
Sbjct: 65 cctaaaaatccttattgctcttgca 89
>34650_fru-mir-365:mirbase
Length = 95
Score = 81.8 bits (41), Expect = 1e-16
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgttttctga-cttagtcttaatgcc 74
|||||||||| ||||||||||| |||||||||||||||| | | | |||| |||||||
Sbjct: 2 agcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgcc 61
Query: 75 cctaaaaatccttattgttcttgca 99
||||||||||||||||| |||||||
Sbjct: 62 cctaaaaatccttattgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 81.8 bits (41), Expect = 1e-16
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 16 agcaagaaaaatgagggactttctggggcagctgtgttttctga-cttagtcttaatgcc 74
|||||||||| ||||||||||| |||||||||||||||| | | | |||| |||||||
Sbjct: 2 agcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgcc 61
Query: 75 cctaaaaatccttattgttcttgca 99
||||||||||||||||| |||||||
Sbjct: 62 cctaaaaatccttattgctcttgca 86
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
||||||||||||||||||||||||||||||||
Sbjct: 55 taatgcccctaaaaatccttattgttcttgca 86
>27445_mdo-mir-365:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgcag 100
|||||||||||||||||||||||| ||||||||
Sbjct: 55 taatgcccctaaaaatccttattgctcttgcag 87
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 54 taatgcccctaaaaatccttattgctcttgca 85
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 41 taatgcccctaaaaatccttattgctcttgca 72
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 55 taatgcccctaaaaatccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 56 taatgcccctaaaaatccttattgctcttgca 87
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgca 99
|||||||||||||||||||||||| |||||||
Sbjct: 55 taatgcccctaaaaatccttattgctcttgca 86
>31549_oan-mir-365:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattgttcttgc 98
|||||||||||||||||||||||| ||||||
Sbjct: 53 taatgcccctaaaaatccttattgctcttgc 83
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 taatgcccctaaaaatccttattg 91
||||||||||||||||||||||||
Sbjct: 54 taatgcccctaaaaatccttattg 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 23 aaaatgagggactttctggggcagctgtgttt 54
||||||||||||||| ||||||| |||||||
Sbjct: 8 aaaatgagggacttttgggggcagatgtgttt 39
