miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00740;mir-370;AAGW01320819.1/1363-1440 9986:Oryctolagus
cuniculus (rabbit)
Length = 78
Score = 91.7 bits (46), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtgg 60
|||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 2 gacagagaggccaggtcacgtctctgcagttgcacggctc-tgagtgcctgctggggtgg 60
Query: 61 aacctggtctgtct 74
||||||||| ||||
Sbjct: 61 aacctggtcagtct 74
>RF00740;mir-370;AAYZ01216249.1/13302-13374 9978:Ochotona princeps
(American pika)
Length = 73
Score = 67.9 bits (34), Expect = 2e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gacagagaagccaggtcacgtctctgcagttacacagctcacgagtgcctgctggggtgg 60
|||||| |||| |||||| ||||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 2 gacagaaaagctgggtcacttctctgcagttgcacagctcatgagtgcctgctggcgtgg 61
Query: 61 aa 62
||
Sbjct: 62 aa 63
