miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>28611_hsa-mir-372:mirbase
          Length = 67

 Score =  131 bits (66), Expect = 6e-32
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgggcctcaaatgtggagcactattctgatgtccaagtggaaagtgctgcgacatttgag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  tgggcctcaaatgtggagcactattctgatgtccaagtggaaagtgctgcgacatttgag 61

                
Query: 61 cgtcac 66
          ||||||
Sbjct: 62 cgtcac 67




>30976_ppy-mir-372:mirbase
          Length = 67

 Score =  131 bits (66), Expect = 6e-32
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgggcctcaaatgtggagcactattctgatgtccaagtggaaagtgctgcgacatttgag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  tgggcctcaaatgtggagcactattctgatgtccaagtggaaagtgctgcgacatttgag 61

                
Query: 61 cgtcac 66
          ||||||
Sbjct: 62 cgtcac 67




>27874_mml-mir-372:mirbase
          Length = 67

 Score =  123 bits (62), Expect = 2e-29
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                      
Query: 5  cctcaaatgtggagcactattctgatgtccaagtggaaagtgctgcgacatttgagcgtc 64
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  cctcaaatgtggagcactattctgatgtccaagtggaaagtgctgcgacatttgagcgtc 65

            
Query: 65 ac 66
          ||
Sbjct: 66 ac 67